Lineage for Species: African clawed frog (Xenopus laevis) [TaxId: 8355]

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. Family a.39.1.5: Calmodulin-like [47502] (24 proteins)
    Duplication: made with two pairs of EF-hands
  6. Protein Calmodulin [47516] (13 species)
  7. Species African clawed frog (Xenopus laevis) [TaxId:8355] [47521] (19 PDB entries)

PDB entries in Species: African clawed frog (Xenopus laevis) [TaxId: 8355]:

  1. Domain(s) for 1cfc:
  2. Domain(s) for 1cfd:
  3. Domain(s) for 1cff:
    • Domain d1cffa_: 1cff A: [17295]
      complex with a binding peptide of the human Ca2+-pump
      complexed with ca
  4. Domain(s) for 1ckk:
    • Domain d1ckka_: 1ckk A: [17294]
      complex with a fragment of the rat ca2+/calmodulin dependent protein kinase
      complexed with ca
  5. Domain(s) for 1dmo:
  6. Domain(s) for 1f70:
    • Domain d1f70a_: 1f70 A: [17288]
      N-terminal domain
      fragment; missing more than one-third of the common structure and/or sequence
  7. Domain(s) for 1f71:
    • Domain d1f71a_: 1f71 A: [17289]
      C-terminal domain
      fragment; missing more than one-third of the common structure and/or sequence
  8. Domain(s) for 1iq5:
    • Domain d1iq5a_: 1iq5 A: [62643]
      complex with a ca2+/calmodulin dependent kinase kinase fragment
      complexed with ca
  9. Domain(s) for 1mux:
  10. Domain(s) for 1nwd:
    • Domain d1nwda_: 1nwd A: [86297]
      complex with the C-terminal fragment of glutamate decarboxylase, chains B and C
      complexed with ca
  11. Domain(s) for 1sy9:
  12. Domain(s) for 1y0v:
    1. Domain d1y0vh1: 1y0v H:5-148 [145893]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    2. Domain d1y0vi1: 1y0v I:5-148 [145894]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    3. Domain d1y0vj1: 1y0v J:5-148 [145895]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    4. Domain d1y0vk1: 1y0v K:5-148 [145896]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    5. Domain d1y0vl1: 1y0v L:5-148 [145897]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    6. Domain d1y0vm1: 1y0v M:5-148 [145898]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
  13. Domain(s) for 2eqc:
    • Domain d2eqca_: 2eqc A: [303793]
      automated match to d2rrta_
      mutant

      fragment; missing more than one-third of the common structure and/or sequence
  14. Domain(s) for 2k3s:
  15. Domain(s) for 2kdu:
  16. Domain(s) for 2mes:
  17. Domain(s) for 2rrt:
    • Domain d2rrta1: 2rrt A:2-72 [243761]
      Other proteins in same PDB: d2rrta2
      automated match to d1cmga_
      mutant

      fragment; missing more than one-third of the common structure and/or sequence
  18. Domain(s) for 5t0x:
  19. Domain(s) for 6ctb:
    • Domain d6ctba_: 6ctb A: [374579]
      automated match to d2n27a_
      fragment; missing more than one-third of the common structure and/or sequence

More info for Species African clawed frog (Xenopus laevis) [TaxId:8355] from a.39.1.5 Calmodulin

Timeline for Species African clawed frog (Xenopus laevis) [TaxId:8355] from a.39.1.5 Calmodulin: