SCOP 1.75: Species: Rat (Rattus rattus) [TaxId: 10117]

Lineage for Species: Rat (Rattus rattus) [TaxId: 10117]

Root: SCOP 1.75
Class a: All alpha proteins [46456] (284 folds)
Fold a.39: EF Hand-like [47472] (4 superfamilies)
core: 4 helices; array of 2 hairpins, opened
Superfamily a.39.1: EF-hand [47473] (11 families)
Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
Family a.39.1.5: Calmodulin-like [47502] (23 proteins)
Duplication: made with two pairs of EF-hands
Protein Calmodulin [47516] (11 species)
Species Rat (Rattus rattus) [TaxId:10117] [47519] (5 PDB entries)
Uniprot P62161

PDB entries in Species: Rat (Rattus rattus) [TaxId: 10117]:

Domain(s) for 1g4y:
- Domain d1g4yr_: 1g4y R: [60252]
  Other proteins in same PDB: d1g4yb_
  complexed with ca, so4
Domain(s) for 1niw:
1. Domain d1niwa_: 1niw A: [80537]
  complexed with an endothelial nitric oxide synthase peptide, chains B, D, F and H
2. Domain d1niwc_: 1niw C: [80538]
  complexed with an endothelial nitric oxide synthase peptide, chains B, D, F and H
3. Domain d1niwe_: 1niw E: [80539]
  complexed with an endothelial nitric oxide synthase peptide, chains B, D, F and H
4. Domain d1niwg_: 1niw G: [80540]
  complexed with an endothelial nitric oxide synthase peptide, chains B, D, F and H
  complexed with ca, egl, mse, so4
Domain(s) for 1qx5:
1. Domain d1qx5b_: 1qx5 B: [104628]
  apocalmodulin; oligomer with swapped EF-hand units
2. Domain d1qx5d_: 1qx5 D: [104629]
  apocalmodulin; oligomer with swapped EF-hand units
3. Domain d1qx5i_: 1qx5 I: [104630]
  apocalmodulin; oligomer with swapped EF-hand units
4. Domain d1qx5j_: 1qx5 J: [104631]
  apocalmodulin; oligomer with swapped EF-hand units
5. Domain d1qx5k_: 1qx5 K: [104632]
  apocalmodulin; oligomer with swapped EF-hand units
6. Domain d1qx5r_: 1qx5 R: [104633]
  apocalmodulin; oligomer with swapped EF-hand units
7. Domain d1qx5t_: 1qx5 T: [104634]
  apocalmodulin; oligomer with swapped EF-hand units
8. Domain d1qx5y_: 1qx5 Y: [104635]
  apocalmodulin; oligomer with swapped EF-hand units
Domain(s) for 1qx7:
1. Domain d1qx7a_: 1qx7 A: [104636]
  apocalmodulin; oligomer with swapped EF-hand units
2. Domain d1qx7b_: 1qx7 B: [104637]
  apocalmodulin; oligomer with swapped EF-hand units
3. Domain d1qx7i_: 1qx7 I: [104638]
  apocalmodulin; oligomer with swapped EF-hand units
4. Domain d1qx7m_: 1qx7 M: [104639]
  apocalmodulin; oligomer with swapped EF-hand units
5. Domain d1qx7r_: 1qx7 R: [104640]
  apocalmodulin; oligomer with swapped EF-hand units
Domain(s) for 3cln:
- Domain d3clna_: 3cln A: [17286]
  complexed with ca