SCOPe 2.08: Family a.39.1.4: Parvalbumin

Lineage for Family a.39.1.4: Parvalbumin

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.39: EF Hand-like [47472] (4 superfamilies)
   core: 4 helices; array of 2 hairpins, opened

4. Superfamily a.39.1: EF-hand [47473] (12 families)
   Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop

5. Family a.39.1.4: Parvalbumin [47492] (3 proteins)
   6-helices; array of 3 hairpins, closed
   made with two-helical hairpin and two EF-hands

Proteins:

1. Oncomodulin [47493] (1 species)

   • Species Norway rat (Rattus norvegicus) [TaxId:10116] [47494] (3 PDB entries)

2. Parvalbumin [47495] (9 species)

   1. Species Carp (Cyprinus carpio) [TaxId:7962] [47496] (7 PDB entries)

   2. Species Chicken (Gallus gallus) [TaxId:9031] [224839] (2 PDB entries)

   3. Species Human (Homo sapiens) [TaxId:9606] [109818] (2 PDB entries)
      Uniprot P20472

   4. Species Leopard shark (Triakis semifasciata) [TaxId:30493] [47498] (1 PDB entry)

   5. Species Norway rat (Rattus norvegicus) [TaxId:10116] [158476] (6 PDB entries)

   6. Species Pike (Esox lucius) [TaxId:8010] [47497] (9 PDB entries)

   7. Species Rat (Rattus rattus) [TaxId:10117] [47501] (1 PDB entry)
      Uniprot P02625

   8. Species Silver hake (Merluccius bilinearis) [TaxId:79698] [47500] (1 PDB entry)

   9. Species Whiting (Merlangius merlangus) [TaxId:8058] [47499] (1 PDB entry)

3. automated matches [254433] (3 species)
   not a true protein

   1. Species Chicken (Gallus gallus) [TaxId:9031] [255387] (2 PDB entries)

   2. Species Houndshark (Mustelus griseus) [TaxId:89020] [355591] (2 PDB entries)

   3. Species Human (Homo sapiens) [TaxId:9606] [254903] (1 PDB entry)

More info for Family a.39.1.4: Parvalbumin

Timeline for Family a.39.1.4: Parvalbumin:

• Family a.39.1.4: Parvalbumin first appeared (with stable ids) in SCOP 1.55
  
• Family a.39.1.4: Parvalbumin appears in SCOPe 2.07