Lineage for Species: Bacteriophage lambda [TaxId: 10710]

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2709316Fold a.35: lambda repressor-like DNA-binding domains [47412] (1 superfamily)
    core: 4 helices; folded leaf, closed
  4. 2709317Superfamily a.35.1: lambda repressor-like DNA-binding domains [47413] (14 families) (S)
  5. 2709338Family a.35.1.2: Phage repressors [47419] (7 proteins)
    consists of different sequence families of HTH repressors of phage origins
  6. 2709358Protein cro lambda repressor [47428] (1 species)
    the fourth helix is replaced with a beta hairpin
    3 helices; folded leaf, opened
  7. 2709359Species Bacteriophage lambda [TaxId:10710] [47429] (12 PDB entries)

PDB entries in Species: Bacteriophage lambda [TaxId: 10710]:

  1. Domain(s) for 1cop:
    1. 2709371Domain d1copd_: 1cop D: [17058]
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    2. 2709372Domain d1cope_: 1cop E: [17059]
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  2. Domain(s) for 1d1l:
    • 2709367Domain d1d1la_: 1d1l A: [17057]
      complexed with so4; mutant
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  3. Domain(s) for 1d1m:
    1. 2709380Domain d1d1ma_: 1d1m A: [17056]
      insertion mutant k56-[dgevk]-f58w
      mutant

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    2. 2709381Domain d1d1mb_: 1d1m B: [17055]
      insertion mutant k56-[dgevk]-f58w
      mutant

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  4. Domain(s) for 1orc:
    • 2709379Domain d1orca_: 1orc A: [17054]
      monomeric insertion mutant
      mutant

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  5. Domain(s) for 2a63:
    • 2709370Domain d2a63a_: 2a63 A: [241214]
      automated match to d1copd_
      mutant

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  6. Domain(s) for 2ecs:
    1. 2709360Domain d2ecsa_: 2ecs A: [163954]
      automated match to d1copd_
      complexed with act, cl, li, so4; mutant

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    2. 2709361Domain d2ecsb_: 2ecs B: [163955]
      automated match to d1copd_
      complexed with act, cl, li, so4; mutant

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  7. Domain(s) for 2orc:
    • 2709382Domain d2orca_: 2orc A: [17060]
      insertion mutant k56-[dgevk]
      mutant

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  8. Domain(s) for 2ovg:
    • 2709362Domain d2ovga_: 2ovg A: [166870]
      automated match to d1copd_
      complexed with epe, so4; mutant

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  9. Domain(s) for 3orc:
    • 2709369Domain d3orca_: 3orc A: [17061]
      engineered cro monomer bound nonspecifically to DNA
      protein/DNA complex

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  10. Domain(s) for 4cro:
    1. 2709373Domain d4croa_: 4cro A: [17048]
      CA-atoms only
      protein/DNA complex

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    2. 2709374Domain d4crob_: 4cro B: [17049]
      CA-atoms only
      protein/DNA complex

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    3. 2709375Domain d4croc_: 4cro C: [17050]
      CA-atoms only
      protein/DNA complex

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    4. 2709376Domain d4crod_: 4cro D: [17051]
      CA-atoms only
      protein/DNA complex

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    5. 2709377Domain d4croe_: 4cro E: [17052]
      CA-atoms only
      protein/DNA complex

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    6. 2709378Domain d4crof_: 4cro F: [17053]
      CA-atoms only
      protein/DNA complex

      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  11. Domain(s) for 5cro:
    1. 2709363Domain d5croa_: 5cro A: [17044]
      complexed with po4
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    2. 2709364Domain d5crob_: 5cro B: [17045]
      complexed with po4
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    3. 2709365Domain d5croc_: 5cro C: [17046]
      complexed with po4
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    4. 2709366Domain d5croo_: 5cro O: [17043]
      complexed with po4
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  12. Domain(s) for 6cro:
    • 2709368Domain d6croa_: 6cro A: [17047]
      protein/DNA complex; complexed with so4
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures

More info for Species Bacteriophage lambda [TaxId:10710] from a.35.1.2 cro lambda repressor

Timeline for Species Bacteriophage lambda [TaxId:10710] from a.35.1.2 cro lambda repressor: