Lineage for Species: Human immunodeficiency virus type 1 [TaxId: 11676]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1991985Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
    4 helices, bundle; helix 3 is shorter than others; up-and-down
  4. 1992228Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families) (S)
  5. 1992229Family a.28.3.1: Retrovirus capsid protein C-terminal domain [47354] (5 protein domains)
  6. 1992235Protein HIV capsid protein, dimerisation domain [47359] (1 species)
  7. 1992236Species Human immunodeficiency virus type 1 [TaxId:11676] [47360] (15 PDB entries)

PDB entries in Species: Human immunodeficiency virus type 1 [TaxId: 11676]:

  1. Domain(s) for 1a43:
  2. Domain(s) for 1a8o:
  3. Domain(s) for 1aum:
  4. Domain(s) for 1baj:
    • 1992251Domain d1baja_: 1baj A: [16954]
      extended at the C-terminus to include a 14-residue GAG p2 domain
  5. Domain(s) for 1e6j:
  6. Domain(s) for 2jo0:
  7. Domain(s) for 2jyg:
  8. Domain(s) for 2jyl:
  9. Domain(s) for 2k1c:
  10. Domain(s) for 2ont:
  11. Domain(s) for 3dik:
  12. Domain(s) for 3dph:
    1. 1992244Domain d3dpha_: 3dph A: [209254]
      automated match to d1baja_
      mutant
    2. 1992245Domain d3dphb_: 3dph B: [209255]
      automated match to d1baja_
      mutant
  13. Domain(s) for 3ds2:
    1. 1992237Domain d3ds2a_: 3ds2 A: [209283]
      automated match to d1baja_
      mutant
    2. 1992238Domain d3ds2b_: 3ds2 B: [209284]
      automated match to d1baja_
      mutant
  14. Domain(s) for 3ds5:
    1. 1992246Domain d3ds5a_: 3ds5 A: [209285]
      automated match to d1baja_
      mutant
    2. 1992247Domain d3ds5b_: 3ds5 B: [209286]
      automated match to d1baja_
      mutant
    3. 1992248Domain d3ds5c_: 3ds5 C: [209287]
      automated match to d1baja_
      mutant
    4. 1992249Domain d3ds5d_: 3ds5 D: [209288]
      automated match to d1baja_
      mutant
  15. Domain(s) for 4ipy:
    1. 1992239Domain d4ipya_: 4ipy A: [228330]
      automated match to d1a43a_
      complexed with edo
    2. 1992240Domain d4ipyb_: 4ipy B: [228332]
      automated match to d1a43a_
      complexed with edo
    3. 1992241Domain d4ipyc_: 4ipy C: [228333]
      automated match to d1a43a_
      complexed with edo
    4. 1992242Domain d4ipyd_: 4ipy D: [228331]
      automated match to d1a43a_
      complexed with edo

More info for Species Human immunodeficiency virus type 1 [TaxId:11676] from a.28.3.1 HIV capsid protein, dimerisation domain

Timeline for Species Human immunodeficiency virus type 1 [TaxId:11676] from a.28.3.1 HIV capsid protein, dimerisation domain: