Lineage for Species: Human immunodeficiency virus type 1 [TaxId: 11676]

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316392Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
    4 helices, bundle; helix 3 is shorter than others; up-and-down
  4. 2316654Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families) (S)
  5. 2316655Family a.28.3.1: Retrovirus capsid protein C-terminal domain [47354] (5 protein domains)
  6. 2316661Protein HIV capsid protein, dimerisation domain [47359] (2 species)
  7. 2316665Species Human immunodeficiency virus type 1 [TaxId:11676] [47360] (15 PDB entries)

PDB entries in Species: Human immunodeficiency virus type 1 [TaxId: 11676]:

  1. Domain(s) for 1a43:
  2. Domain(s) for 1a8o:
  3. Domain(s) for 1aum:
  4. Domain(s) for 1baj:
    • 2316676Domain d1baja_: 1baj A: [16954]
      extended at the C-terminus to include a 14-residue GAG p2 domain
  5. Domain(s) for 1e6j:
  6. Domain(s) for 2jo0:
  7. Domain(s) for 2jyg:
  8. Domain(s) for 2jyl:
  9. Domain(s) for 2k1c:
  10. Domain(s) for 2ont:
  11. Domain(s) for 3dik:
  12. Domain(s) for 3dph:
    1. 2316673Domain d3dpha_: 3dph A: [209254]
      automated match to d1baja_
      mutant
    2. 2316674Domain d3dphb_: 3dph B: [209255]
      automated match to d1baja_
      mutant
  13. Domain(s) for 3ds2:
    1. 2316666Domain d3ds2a_: 3ds2 A: [209283]
      automated match to d1baja_
      mutant
    2. 2316667Domain d3ds2b_: 3ds2 B: [209284]
      automated match to d1baja_
      mutant
  14. Domain(s) for 3ds5:
    1. 2316678Domain d3ds5a_: 3ds5 A: [209285]
      automated match to d1baja_
      mutant
    2. 2316679Domain d3ds5b_: 3ds5 B: [209286]
      automated match to d1baja_
      mutant
    3. 2316680Domain d3ds5c_: 3ds5 C: [209287]
      automated match to d1baja_
      mutant
    4. 2316681Domain d3ds5d_: 3ds5 D: [209288]
      automated match to d1baja_
      mutant
  15. Domain(s) for 4ipy:
    1. 2316669Domain d4ipya_: 4ipy A: [228330]
      automated match to d1a43a_
      complexed with edo
    2. 2316670Domain d4ipyb_: 4ipy B: [228332]
      automated match to d1a43a_
      complexed with edo
    3. 2316671Domain d4ipyc_: 4ipy C: [228333]
      automated match to d1a43a_
      complexed with edo
    4. 2316672Domain d4ipyd_: 4ipy D: [228331]
      automated match to d1a43a_
      complexed with edo

More info for Species Human immunodeficiency virus type 1 [TaxId:11676] from a.28.3.1 HIV capsid protein, dimerisation domain

Timeline for Species Human immunodeficiency virus type 1 [TaxId:11676] from a.28.3.1 HIV capsid protein, dimerisation domain: