Lineage for Protein: HIV capsid protein, dimerisation domain

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316392Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
    4 helices, bundle; helix 3 is shorter than others; up-and-down
  4. 2316654Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families) (S)
  5. 2316655Family a.28.3.1: Retrovirus capsid protein C-terminal domain [47354] (5 proteins)
  6. 2316661Protein HIV capsid protein, dimerisation domain [47359] (2 species)

Species:

  1. 2316662Human immunodeficiency virus type 1 group m subtype b (isolate ny5) [TaxId:11698] [346174] (1 PDB entry)
  2. 2316665Human immunodeficiency virus type 1 [TaxId:11676] [47360] (15 PDB entries)
    1. Domain for 1a43:
    2. Domain for 1a8o:
    3. Domain for 1aum:
    4. Domain for 1baj:
      • 2316676Domain d1baja_: 1baj A: [16954]
        extended at the C-terminus to include a 14-residue GAG p2 domain
    5. Domain for 1e6j:
    6. Domain for 2jo0:
    7. Domain for 2jyg:
    8. Domain for 2jyl:
    9. Domain for 2k1c:
    10. Domain for 2ont:
    11. Domain for 3dik:
    12. Domains for 3dph:
      1. 2316673Domain d3dpha_: 3dph A: [209254]
        automated match to d1baja_
        mutant
      2. 2316674Domain d3dphb_: 3dph B: [209255]
        automated match to d1baja_
        mutant
    13. Domains for 3ds2:
      1. 2316666Domain d3ds2a_: 3ds2 A: [209283]
        automated match to d1baja_
        mutant
      2. 2316667Domain d3ds2b_: 3ds2 B: [209284]
        automated match to d1baja_
        mutant
    14. Domains for 3ds5:
      1. 2316678Domain d3ds5a_: 3ds5 A: [209285]
        automated match to d1baja_
        mutant
      2. 2316679Domain d3ds5b_: 3ds5 B: [209286]
        automated match to d1baja_
        mutant
      3. 2316680Domain d3ds5c_: 3ds5 C: [209287]
        automated match to d1baja_
        mutant
      4. 2316681Domain d3ds5d_: 3ds5 D: [209288]
        automated match to d1baja_
        mutant
    15. Domains for 4ipy:
      1. 2316669Domain d4ipya_: 4ipy A: [228330]
        automated match to d1a43a_
        complexed with edo
      2. 2316670Domain d4ipyb_: 4ipy B: [228332]
        automated match to d1a43a_
        complexed with edo
      3. 2316671Domain d4ipyc_: 4ipy C: [228333]
        automated match to d1a43a_
        complexed with edo
      4. 2316672Domain d4ipyd_: 4ipy D: [228331]
        automated match to d1a43a_
        complexed with edo

More info for Protein HIV capsid protein, dimerisation domain from a.28.3.1: Retrovirus capsid protein C-terminal domain

Timeline for Protein HIV capsid protein, dimerisation domain from a.28.3.1: Retrovirus capsid protein C-terminal domain: