Lineage for Protein: Dodecameric ferritin homolog

  1. Root: SCOP 1.73
  2. 631650Class a: All alpha proteins [46456] (258 folds)
  3. 638518Fold a.25: Ferritin-like [47239] (4 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 638519Superfamily a.25.1: Ferritin-like [47240] (5 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 638520Family a.25.1.1: Ferritin [47241] (9 proteins)
  6. 638728Protein Dodecameric ferritin homolog [47250] (13 species)

Species:

  1. 638729Agrobacterium tumefaciens, Dps [TaxId:358] [89027] (1 PDB entry)
  2. 638736Archaeon Halobacterium salinarum [TaxId:2242] [101135] (5 PDB entries)
    1. Domains for 1moj:
      1. 638741Domain d1moja_: 1moj A: [91367]
      2. 638742Domain d1mojb_: 1moj B: [91368]
      3. 638743Domain d1mojc_: 1moj C: [91369]
      4. 638744Domain d1mojd_: 1moj D: [91370]
        complexed with fe, mg, na
    2. Domains for 1tjo:
      1. 638737Domain d1tjoa_: 1tjo A: [112461]
      2. 638738Domain d1tjob_: 1tjo B: [112462]
      3. 638739Domain d1tjoc_: 1tjo C: [112463]
      4. 638740Domain d1tjod_: 1tjo D: [112464]
        complexed with fe, mg, na, so4
    3. Domains for 1tk6:
      1. 638745Domain d1tk6a_: 1tk6 A: [112466]
      2. 638746Domain d1tk6b_: 1tk6 B: [112467]
      3. 638747Domain d1tk6c_: 1tk6 C: [112468]
      4. 638748Domain d1tk6d_: 1tk6 D: [112469]
        complexed with fe, mg, na, so4
    4. Domains for 1tko:
      1. 638753Domain d1tkoa_: 1tko A: [112474]
      2. 638754Domain d1tkob_: 1tko B: [112475]
      3. 638755Domain d1tkoc_: 1tko C: [112476]
      4. 638756Domain d1tkod_: 1tko D: [112477]
        complexed with fe, na, so4
    5. Domains for 1tkp:
      1. 638749Domain d1tkpa_: 1tkp A: [112478]
      2. 638750Domain d1tkpb_: 1tkp B: [112479]
      3. 638751Domain d1tkpc_: 1tkp C: [112480]
      4. 638752Domain d1tkpd_: 1tkp D: [112481]
        complexed with fe, na, so4
  3. 638757Bacillus anthracis, Dlp-1 [TaxId:1392] [74705] (1 PDB entry)
  4. 638762Bacillus anthracis, Dlp-2 [TaxId:1392] [74706] (1 PDB entry)
  5. 638767Bacillus brevis, Dps [TaxId:1393] [89026] (1 PDB entry)
  6. 638772Escherichia coli, Dps [TaxId:562] [47251] (7 PDB entries)
    ferritin homolog that binds to and protects DNA
    1. Domains for 1dps:
      1. 638773Domain d1dpsa_: 1dps A: [16716]
      2. 638774Domain d1dpsb_: 1dps B: [16717]
      3. 638775Domain d1dpsc_: 1dps C: [16718]
      4. 638776Domain d1dpsd_: 1dps D: [16719]
      5. 638777Domain d1dpse_: 1dps E: [16720]
      6. 638778Domain d1dpsf_: 1dps F: [16721]
      7. 638779Domain d1dpsg_: 1dps G: [16722]
      8. 638780Domain d1dpsh_: 1dps H: [16723]
      9. 638781Domain d1dpsi_: 1dps I: [16724]
      10. 638782Domain d1dpsj_: 1dps J: [16725]
      11. 638783Domain d1dpsk_: 1dps K: [16726]
      12. 638784Domain d1dpsl_: 1dps L: [16727]
        complexed with na; mutant
    2. Domains for 1f30:
      1. 638845Domain d1f30a_: 1f30 A: [83216]
      2. 638846Domain d1f30b_: 1f30 B: [83217]
      3. 638847Domain d1f30c_: 1f30 C: [83218]
      4. 638848Domain d1f30d_: 1f30 D: [83219]
      5. 638849Domain d1f30e_: 1f30 E: [83220]
      6. 638850Domain d1f30f_: 1f30 F: [83221]
      7. 638851Domain d1f30g_: 1f30 G: [83222]
      8. 638852Domain d1f30h_: 1f30 H: [83223]
      9. 638853Domain d1f30i_: 1f30 I: [83224]
      10. 638854Domain d1f30j_: 1f30 J: [83225]
      11. 638855Domain d1f30k_: 1f30 K: [83226]
      12. 638856Domain d1f30l_: 1f30 L: [83227]
        complexed with trs, zn
    3. Domains for 1f33:
      1. 638785Domain d1f33a_: 1f33 A: [83228]
      2. 638786Domain d1f33b_: 1f33 B: [83229]
      3. 638787Domain d1f33c_: 1f33 C: [83230]
      4. 638788Domain d1f33d_: 1f33 D: [83231]
      5. 638789Domain d1f33e_: 1f33 E: [83232]
      6. 638790Domain d1f33f_: 1f33 F: [83233]
      7. 638791Domain d1f33g_: 1f33 G: [83234]
      8. 638792Domain d1f33h_: 1f33 H: [83235]
      9. 638793Domain d1f33i_: 1f33 I: [83236]
      10. 638794Domain d1f33j_: 1f33 J: [83237]
      11. 638795Domain d1f33k_: 1f33 K: [83238]
      12. 638796Domain d1f33l_: 1f33 L: [83239]
        complexed with trs
    4. Domains for 1jre:
      1. 638797Domain d1jrea_: 1jre A: [84193]
      2. 638798Domain d1jreb_: 1jre B: [84194]
      3. 638799Domain d1jrec_: 1jre C: [84195]
      4. 638800Domain d1jred_: 1jre D: [84196]
      5. 638801Domain d1jree_: 1jre E: [84197]
      6. 638802Domain d1jref_: 1jre F: [84198]
      7. 638803Domain d1jreg_: 1jre G: [84199]
      8. 638804Domain d1jreh_: 1jre H: [84200]
      9. 638805Domain d1jrei_: 1jre I: [84201]
      10. 638806Domain d1jrej_: 1jre J: [84202]
      11. 638807Domain d1jrek_: 1jre K: [84203]
      12. 638808Domain d1jrel_: 1jre L: [84204]
        complexed with cd, trs; mutant
    5. Domains for 1jts:
      1. 638809Domain d1jtsa_: 1jts A: [84206]
      2. 638810Domain d1jtsb_: 1jts B: [84207]
      3. 638811Domain d1jtsc_: 1jts C: [84208]
      4. 638812Domain d1jtsd_: 1jts D: [84209]
      5. 638813Domain d1jtse_: 1jts E: [84210]
      6. 638814Domain d1jtsf_: 1jts F: [84211]
      7. 638815Domain d1jtsg_: 1jts G: [84212]
      8. 638816Domain d1jtsh_: 1jts H: [84213]
      9. 638817Domain d1jtsi_: 1jts I: [84214]
      10. 638818Domain d1jtsj_: 1jts J: [84215]
      11. 638819Domain d1jtsk_: 1jts K: [84216]
      12. 638820Domain d1jtsl_: 1jts L: [84217]
      13. 638821Domain d1jtsm_: 1jts M: [84218]
      14. 638822Domain d1jtsn_: 1jts N: [84219]
      15. 638823Domain d1jtso_: 1jts O: [84220]
      16. 638824Domain d1jtsp_: 1jts P: [84221]
      17. 638825Domain d1jtsq_: 1jts Q: [84222]
      18. 638826Domain d1jtsr_: 1jts R: [84223]
      19. 638827Domain d1jtss_: 1jts S: [84224]
      20. 638828Domain d1jtst_: 1jts T: [84225]
      21. 638829Domain d1jtsu_: 1jts U: [84226]
      22. 638830Domain d1jtsv_: 1jts V: [84227]
      23. 638831Domain d1jtsw_: 1jts W: [84228]
      24. 638832Domain d1jtsx_: 1jts X: [84229]
        complexed with trs; mutant
    6. Domains for 1l8h:
      1. 638857Domain d1l8ha_: 1l8h A: [84538]
      2. 638858Domain d1l8hb_: 1l8h B: [84539]
      3. 638859Domain d1l8hc_: 1l8h C: [84540]
      4. 638860Domain d1l8hd_: 1l8h D: [84541]
      5. 638861Domain d1l8he_: 1l8h E: [84542]
      6. 638862Domain d1l8hf_: 1l8h F: [84543]
      7. 638863Domain d1l8hg_: 1l8h G: [84544]
      8. 638864Domain d1l8hh_: 1l8h H: [84545]
      9. 638865Domain d1l8hi_: 1l8h I: [84546]
      10. 638866Domain d1l8hj_: 1l8h J: [84547]
      11. 638867Domain d1l8hk_: 1l8h K: [84548]
      12. 638868Domain d1l8hl_: 1l8h L: [84549]
        complexed with k, trs; mutant
    7. Domains for 1l8i:
      1. 638833Domain d1l8ia_: 1l8i A: [84550]
      2. 638834Domain d1l8ib_: 1l8i B: [84551]
      3. 638835Domain d1l8ic_: 1l8i C: [84552]
      4. 638836Domain d1l8id_: 1l8i D: [84553]
      5. 638837Domain d1l8ie_: 1l8i E: [84554]
      6. 638838Domain d1l8if_: 1l8i F: [84555]
      7. 638839Domain d1l8ig_: 1l8i G: [84556]
      8. 638840Domain d1l8ih_: 1l8i H: [84557]
      9. 638841Domain d1l8ii_: 1l8i I: [84558]
      10. 638842Domain d1l8ij_: 1l8i J: [84559]
      11. 638843Domain d1l8ik_: 1l8i K: [84560]
      12. 638844Domain d1l8il_: 1l8i L: [84561]
        complexed with k, trs; mutant
  7. 638869Helicobacter pylori, Nap [TaxId:210] [81743] (1 PDB entry)
  8. 638882Lactococcus lactis, DpsA [TaxId:1358] [140434] (1 PDB entry)
  9. 638887Lactococcus lactis, DpsB [TaxId:1358] [140433] (1 PDB entry)
  10. 638900Listeria innocua [TaxId:1642] [47252] (4 PDB entries)
    1. Domains for 1qgh:
      1. 638931Domain d1qgha_: 1qgh A: [16728]
      2. 638932Domain d1qghb_: 1qgh B: [16729]
      3. 638933Domain d1qghc_: 1qgh C: [16730]
      4. 638934Domain d1qghd_: 1qgh D: [16731]
      5. 638935Domain d1qghe_: 1qgh E: [16732]
      6. 638936Domain d1qghf_: 1qgh F: [16733]
      7. 638937Domain d1qghg_: 1qgh G: [16734]
      8. 638938Domain d1qghh_: 1qgh H: [16735]
      9. 638939Domain d1qghi_: 1qgh I: [16736]
      10. 638940Domain d1qghj_: 1qgh J: [16737]
      11. 638941Domain d1qghk_: 1qgh K: [16738]
      12. 638942Domain d1qghl_: 1qgh L: [16739]
    2. Domains for 2bjy:
      1. 638943Domain d2bjya1: 2bjy A:7-156 [128634]
        mutant
      2. 638944Domain d2bjyb1: 2bjy B:7-156 [128635]
        automatically matched to 2BJY A:7-156
        mutant
      3. 638945Domain d2bjyc1: 2bjy C:7-156 [128636]
        automatically matched to 2BJY A:7-156
        mutant
      4. 638946Domain d2bjyd1: 2bjy D:7-156 [128637]
        automatically matched to 2BJY A:7-156
        mutant
      5. 638947Domain d2bjye1: 2bjy E:7-156 [128638]
        automatically matched to 2BJY A:7-156
        mutant
      6. 638948Domain d2bjyf1: 2bjy F:7-156 [128639]
        automatically matched to 2BJY A:7-156
        mutant
      7. 638949Domain d2bjyg1: 2bjy G:7-156 [128640]
        automatically matched to 2BJY A:7-156
        mutant
      8. 638950Domain d2bjyh1: 2bjy H:8-156 [128641]
        automatically matched to 2BJY A:7-156
        mutant
      9. 638951Domain d2bjyi1: 2bjy I:7-156 [128642]
        automatically matched to 2BJY A:7-156
        mutant
      10. 638952Domain d2bjyj1: 2bjy J:7-156 [128643]
        automatically matched to 2BJY A:7-156
        mutant
      11. 638953Domain d2bjyk1: 2bjy K:8-156 [128644]
        automatically matched to 2BJY A:7-156
        mutant
      12. 638954Domain d2bjyl1: 2bjy L:7-156 [128645]
        automatically matched to 2BJY A:7-156
        mutant
    3. Domains for 2bk6:
      1. 638901Domain d2bk6a1: 2bk6 A:7-156 [128660]
        mutant
      2. 638902Domain d2bk6b1: 2bk6 B:7-156 [128661]
        automatically matched to 2BK6 A:7-156
        mutant
      3. 638903Domain d2bk6c1: 2bk6 C:7-156 [128662]
        automatically matched to 2BK6 A:7-156
        mutant
      4. 638904Domain d2bk6d1: 2bk6 D:7-156 [128663]
        automatically matched to 2BK6 A:7-156
        mutant
      5. 638905Domain d2bk6e1: 2bk6 E:7-156 [128664]
        automatically matched to 2BK6 A:7-156
        mutant
      6. 638906Domain d2bk6f1: 2bk6 F:7-156 [128665]
        automatically matched to 2BK6 A:7-156
        mutant
    4. Domains for 2bkc:
      1. 638907Domain d2bkca1: 2bkc A:7-156 [128675]
        mutant
      2. 638908Domain d2bkcb1: 2bkc B:7-156 [128676]
        automatically matched to 2BKC A:7-156
        mutant
      3. 638909Domain d2bkcc1: 2bkc C:7-156 [128677]
        automatically matched to 2BKC A:7-156
        mutant
      4. 638910Domain d2bkcd1: 2bkc D:7-156 [128678]
        automatically matched to 2BKC A:7-156
        mutant
      5. 638911Domain d2bkce1: 2bkc E:7-156 [128679]
        automatically matched to 2BKC A:7-156
        mutant
      6. 638912Domain d2bkcf1: 2bkc F:7-156 [128680]
        automatically matched to 2BKC A:7-156
        mutant
      7. 638913Domain d2bkcg1: 2bkc G:7-156 [128681]
        automatically matched to 2BKC A:7-156
        mutant
      8. 638914Domain d2bkch1: 2bkc H:7-156 [128682]
        automatically matched to 2BKC A:7-156
        mutant
      9. 638915Domain d2bkci1: 2bkc I:7-156 [128683]
        automatically matched to 2BKC A:7-156
        mutant
      10. 638916Domain d2bkcj1: 2bkc J:7-156 [128684]
        automatically matched to 2BKC A:7-156
        mutant
      11. 638917Domain d2bkck1: 2bkc K:7-156 [128685]
        automatically matched to 2BKC A:7-156
        mutant
      12. 638918Domain d2bkcl1: 2bkc L:7-156 [128686]
        automatically matched to 2BKC A:7-156
        mutant
      13. 638919Domain d2bkcm1: 2bkc M:7-156 [128687]
        automatically matched to 2BKC A:7-156
        mutant
      14. 638920Domain d2bkcn1: 2bkc N:7-156 [128688]
        automatically matched to 2BKC A:7-156
        mutant
      15. 638921Domain d2bkco1: 2bkc O:7-156 [128689]
        automatically matched to 2BKC A:7-156
        mutant
      16. 638922Domain d2bkcp1: 2bkc P:7-156 [128690]
        automatically matched to 2BKC A:7-156
        mutant
      17. 638923Domain d2bkcq1: 2bkc Q:7-156 [128691]
        automatically matched to 2BKC A:7-156
        mutant
      18. 638924Domain d2bkcr1: 2bkc R:8-156 [128692]
        automatically matched to 2BKC A:7-156
        mutant
      19. 638925Domain d2bkcs1: 2bkc S:7-156 [128693]
        automatically matched to 2BKC A:7-156
        mutant
      20. 638926Domain d2bkct1: 2bkc T:7-156 [128694]
        automatically matched to 2BKC A:7-156
        mutant
      21. 638927Domain d2bkcu1: 2bkc U:7-156 [128695]
        automatically matched to 2BKC A:7-156
        mutant
      22. 638928Domain d2bkcv1: 2bkc V:7-156 [128696]
        automatically matched to 2BKC A:7-156
        mutant
      23. 638929Domain d2bkcx1: 2bkc X:7-156 [128697]
        automatically matched to 2BKC A:7-156
        mutant
      24. 638930Domain d2bkcy1: 2bkc Y:7-156 [128698]
        automatically matched to 2BKC A:7-156
        mutant
  11. 638955Mycobacterium smegmatis [TaxId:1772] [109784] (4 PDB entries)
    1. Domains for 1uvh:
      1. 638963Domain d1uvha1: 1uvh A:5-161 [119706]
        automatically matched to d1veia_
        complexed with fe
      2. 638964Domain d1uvhb1: 1uvh B:5-161 [119707]
        automatically matched to d1veia_
        complexed with fe
      3. 638965Domain d1uvhc1: 1uvh C:5-161 [119708]
        automatically matched to d1veia_
        complexed with fe
      4. 638966Domain d1uvhd1: 1uvh D:5-161 [119709]
        automatically matched to d1veia_
        complexed with fe
    2. Domain for 1vei:
    3. Domains for 1vel:
      1. 638956Domain d1vela_: 1vel A: [108532]
      2. 638957Domain d1velb_: 1vel B: [108533]
      3. 638958Domain d1velc_: 1vel C: [108534]
      4. 638959Domain d1veld_: 1vel D: [108535]
      5. 638960Domain d1vele_: 1vel E: [108536]
      6. 638961Domain d1velf_: 1vel F: [108537]
        complexed with cd, na, so4
    4. Domains for 1veq:
      1. 638967Domain d1veqa_: 1veq A: [108538]
      2. 638968Domain d1veqb_: 1veq B: [108539]
      3. 638969Domain d1veqc_: 1veq C: [108540]
      4. 638970Domain d1veqd_: 1veq D: [108541]
      5. 638971Domain d1veqe_: 1veq E: [108542]
      6. 638972Domain d1veqf_: 1veq F: [108543]
      7. 638973Domain d1veqg_: 1veq G: [108544]
      8. 638974Domain d1veqh_: 1veq H: [108545]
      9. 638975Domain d1veqi_: 1veq I: [108546]
      10. 638976Domain d1veqj_: 1veq J: [108547]
      11. 638977Domain d1veqk_: 1veq K: [108548]
      12. 638978Domain d1veql_: 1veq L: [108549]
        complexed with fe
  12. 638979Streptococcus suis [TaxId:1307] [101134] (2 PDB entries)
    1. Domains for 1umn:
      1. 638980Domain d1umna_: 1umn A: [99607]
      2. 638981Domain d1umnb_: 1umn B: [99608]
      3. 638982Domain d1umnc_: 1umn C: [99609]
      4. 638983Domain d1umnd_: 1umn D: [99610]
      5. 638984Domain d1umne_: 1umn E: [99611]
      6. 638985Domain d1umnf_: 1umn F: [99612]
      7. 638986Domain d1umng_: 1umn G: [99613]
      8. 638987Domain d1umnh_: 1umn H: [99614]
      9. 638988Domain d1umni_: 1umn I: [99615]
      10. 638989Domain d1umnj_: 1umn J: [99616]
      11. 638990Domain d1umnk_: 1umn K: [99617]
      12. 638991Domain d1umnl_: 1umn L: [99618]
        complexed with ca, cl, epe
    2. Domains for 2bw1:
      1. 638992Domain d2bw1a1: 2bw1 A:22-172 [129305]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      2. 638993Domain d2bw1b1: 2bw1 B:22-172 [129306]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      3. 638994Domain d2bw1c1: 2bw1 C:22-172 [129307]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      4. 638995Domain d2bw1d1: 2bw1 D:22-172 [129308]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      5. 638996Domain d2bw1e1: 2bw1 E:22-172 [129309]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      6. 638997Domain d2bw1f1: 2bw1 F:22-172 [129310]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      7. 638998Domain d2bw1g1: 2bw1 G:22-172 [129311]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      8. 638999Domain d2bw1h1: 2bw1 H:22-172 [129312]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      9. 639000Domain d2bw1i1: 2bw1 I:22-172 [129313]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      10. 639001Domain d2bw1j1: 2bw1 J:22-172 [129314]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      11. 639002Domain d2bw1k1: 2bw1 K:22-172 [129315]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
      12. 639003Domain d2bw1l1: 2bw1 L:22-172 [129316]
        automatically matched to d1umng_
        complexed with ca, epe, fe; mutant
  13. 639004Treponema pallidum, TpF1 [TaxId:160] [140435] (1 PDB entry)

More info for Protein Dodecameric ferritin homolog from a.25.1.1: Ferritin

Timeline for Protein Dodecameric ferritin homolog from a.25.1.1: Ferritin: