Lineage for Protein: Bacterioferritin (cytochrome b1)

  1. Root: SCOP 1.73
  2. 631650Class a: All alpha proteins [46456] (258 folds)
  3. 638518Fold a.25: Ferritin-like [47239] (4 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 638519Superfamily a.25.1: Ferritin-like [47240] (5 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 638520Family a.25.1.1: Ferritin [47241] (9 proteins)
  6. 638604Protein Bacterioferritin (cytochrome b1) [47244] (4 species)
    binds heme between two subunits; 24-mer

Species:

  1. 638605Azotobacter vinelandii [TaxId:354] [140431] (3 PDB entries)
    1. Domains for 1sof:
      1. 638614Domain d1sofa1: 1sof A:1-154 [118973]
        complexed with ba, fe2, hem, mg
      2. 638615Domain d1sofb1: 1sof B:1-154 [118974]
        automatically matched to 1SOF A:1-154
        complexed with ba, fe2, hem, mg
      3. 638616Domain d1sofc1: 1sof C:1-154 [118975]
        automatically matched to 1SOF A:1-154
        complexed with ba, fe2, hem, mg
      4. 638617Domain d1sofd1: 1sof D:1-154 [118976]
        automatically matched to 1SOF A:1-154
        complexed with ba, fe2, hem, mg
      5. 638618Domain d1sofe1: 1sof E:1-154 [118977]
        automatically matched to 1SOF A:1-154
        complexed with ba, fe2, hem, mg
      6. 638619Domain d1soff1: 1sof F:1-154 [118978]
        automatically matched to 1SOF A:1-154
        complexed with ba, fe2, hem, mg
      7. 638620Domain d1sofg1: 1sof G:1-154 [118979]
        automatically matched to 1SOF A:1-154
        complexed with ba, fe2, hem, mg
      8. 638621Domain d1sofh1: 1sof H:1-154 [118980]
        automatically matched to 1SOF A:1-154
        complexed with ba, fe2, hem, mg
    2. Domains for 2fkz:
      1. 638606Domain d2fkza1: 2fkz A:1-154 [133688]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      2. 638607Domain d2fkzb1: 2fkz B:1-154 [133689]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      3. 638608Domain d2fkzc1: 2fkz C:1-154 [133690]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      4. 638609Domain d2fkzd1: 2fkz D:1-154 [133691]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      5. 638610Domain d2fkze1: 2fkz E:1-154 [133692]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      6. 638611Domain d2fkzf1: 2fkz F:1-154 [133693]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      7. 638612Domain d2fkzg1: 2fkz G:1-154 [133694]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      8. 638613Domain d2fkzh1: 2fkz H:1-154 [133695]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
    3. Domains for 2fl0:
      1. 638622Domain d2fl0a1: 2fl0 A:1-154 [133696]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      2. 638623Domain d2fl0b1: 2fl0 B:1-154 [133697]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      3. 638624Domain d2fl0c1: 2fl0 C:1-154 [133698]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      4. 638625Domain d2fl0d1: 2fl0 D:1-154 [133699]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      5. 638626Domain d2fl0e1: 2fl0 E:1-154 [133700]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      6. 638627Domain d2fl0f1: 2fl0 F:1-154 [133701]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      7. 638628Domain d2fl0g1: 2fl0 G:1-154 [133702]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
      8. 638629Domain d2fl0h1: 2fl0 H:1-154 [133703]
        automatically matched to 1SOF A:1-154
        complexed with fe2, hem, mg
  2. 638630Desulfovibrio desulfuricans [TaxId:876] [89025] (3 PDB entries)
    1. Domains for 1nf4:
      1. 638631Domain d1nf4a_: 1nf4 A: [85598]
      2. 638632Domain d1nf4b_: 1nf4 B: [85599]
      3. 638633Domain d1nf4c_: 1nf4 C: [85600]
      4. 638634Domain d1nf4d_: 1nf4 D: [85601]
      5. 638635Domain d1nf4e_: 1nf4 E: [85602]
      6. 638636Domain d1nf4f_: 1nf4 F: [85603]
      7. 638637Domain d1nf4g_: 1nf4 G: [85604]
      8. 638638Domain d1nf4h_: 1nf4 H: [85605]
      9. 638639Domain d1nf4i_: 1nf4 I: [85606]
      10. 638640Domain d1nf4j_: 1nf4 J: [85607]
      11. 638641Domain d1nf4k_: 1nf4 K: [85608]
      12. 638642Domain d1nf4l_: 1nf4 L: [85609]
      13. 638643Domain d1nf4m_: 1nf4 M: [85610]
      14. 638644Domain d1nf4n_: 1nf4 N: [85611]
      15. 638645Domain d1nf4o_: 1nf4 O: [85612]
      16. 638646Domain d1nf4p_: 1nf4 P: [85613]
        complexed with fe2, fec, so4
    2. Domains for 1nf6:
      1. 638663Domain d1nf6a_: 1nf6 A: [85614]
      2. 638664Domain d1nf6b_: 1nf6 B: [85615]
      3. 638665Domain d1nf6c_: 1nf6 C: [85616]
      4. 638666Domain d1nf6d_: 1nf6 D: [85617]
      5. 638667Domain d1nf6e_: 1nf6 E: [85618]
      6. 638668Domain d1nf6f_: 1nf6 F: [85619]
      7. 638669Domain d1nf6g_: 1nf6 G: [85620]
      8. 638670Domain d1nf6h_: 1nf6 H: [85621]
      9. 638671Domain d1nf6i_: 1nf6 I: [85622]
      10. 638672Domain d1nf6j_: 1nf6 J: [85623]
      11. 638673Domain d1nf6k_: 1nf6 K: [85624]
      12. 638674Domain d1nf6l_: 1nf6 L: [85625]
      13. 638675Domain d1nf6m_: 1nf6 M: [85626]
      14. 638676Domain d1nf6n_: 1nf6 N: [85627]
      15. 638677Domain d1nf6o_: 1nf6 O: [85628]
      16. 638678Domain d1nf6p_: 1nf6 P: [85629]
        complexed with cry, fe, fec, so4
    3. Domains for 1nfv:
      1. 638647Domain d1nfva_: 1nfv A: [85642]
      2. 638648Domain d1nfvb_: 1nfv B: [85643]
      3. 638649Domain d1nfvc_: 1nfv C: [85644]
      4. 638650Domain d1nfvd_: 1nfv D: [85645]
      5. 638651Domain d1nfve_: 1nfv E: [85646]
      6. 638652Domain d1nfvf_: 1nfv F: [85647]
      7. 638653Domain d1nfvg_: 1nfv G: [85648]
      8. 638654Domain d1nfvh_: 1nfv H: [85649]
      9. 638655Domain d1nfvi_: 1nfv I: [85650]
      10. 638656Domain d1nfvj_: 1nfv J: [85651]
      11. 638657Domain d1nfvk_: 1nfv K: [85652]
      12. 638658Domain d1nfvl_: 1nfv L: [85653]
      13. 638659Domain d1nfvm_: 1nfv M: [85654]
      14. 638660Domain d1nfvn_: 1nfv N: [85655]
      15. 638661Domain d1nfvo_: 1nfv O: [85656]
      16. 638662Domain d1nfvp_: 1nfv P: [85657]
        complexed with cry, fe, fec, so4
  3. 638679Escherichia coli [TaxId:562] [47245] (3 PDB entries)
    1. Domains for 1bcf:
      1. 638688Domain d1bcfa_: 1bcf A: [16648]
      2. 638689Domain d1bcfb_: 1bcf B: [16649]
        complexed with hem, mn
      3. 638690Domain d1bcfc_: 1bcf C: [118423]
        duplicate of 1BCF A
        complexed with hem, mn
      4. 638691Domain d1bcfd_: 1bcf D: [118424]
        duplicate of 1BCF A
        complexed with hem, mn
      5. 638692Domain d1bcfe_: 1bcf E: [118425]
        duplicate of 1BCF A
        complexed with hem, mn
      6. 638693Domain d1bcff_: 1bcf F: [118426]
        duplicate of 1BCF A
        complexed with hem, mn
      7. 638694Domain d1bcfg_: 1bcf G: [118427]
        duplicate of 1BCF A
        complexed with hem, mn
      8. 638695Domain d1bcfh_: 1bcf H: [118428]
        duplicate of 1BCF A
        complexed with hem, mn
      9. 638696Domain d1bcfi_: 1bcf I: [118429]
        duplicate of 1BCF A
        complexed with hem, mn
      10. 638697Domain d1bcfj_: 1bcf J: [118430]
        duplicate of 1BCF A
        complexed with hem, mn
      11. 638698Domain d1bcfk_: 1bcf K: [118431]
        duplicate of 1BCF A
        complexed with hem, mn
      12. 638699Domain d1bcfl_: 1bcf L: [118432]
        duplicate of 1BCF A
        complexed with hem, mn
    2. Domains for 1bfr:
      1. 638700Domain d1bfra_: 1bfr A: [16650]
      2. 638701Domain d1bfrb_: 1bfr B: [16651]
      3. 638702Domain d1bfrc_: 1bfr C: [16652]
      4. 638703Domain d1bfrd_: 1bfr D: [16653]
      5. 638704Domain d1bfre_: 1bfr E: [16654]
      6. 638705Domain d1bfrf_: 1bfr F: [16655]
      7. 638706Domain d1bfrg_: 1bfr G: [16656]
      8. 638707Domain d1bfrh_: 1bfr H: [16657]
      9. 638708Domain d1bfri_: 1bfr I: [16658]
      10. 638709Domain d1bfrj_: 1bfr J: [16659]
      11. 638710Domain d1bfrk_: 1bfr K: [16660]
      12. 638711Domain d1bfrl_: 1bfr L: [16661]
      13. 638712Domain d1bfrm_: 1bfr M: [16662]
      14. 638713Domain d1bfrn_: 1bfr N: [16663]
      15. 638714Domain d1bfro_: 1bfr O: [16664]
      16. 638715Domain d1bfrp_: 1bfr P: [16665]
      17. 638716Domain d1bfrq_: 1bfr Q: [16666]
      18. 638717Domain d1bfrr_: 1bfr R: [16667]
      19. 638718Domain d1bfrs_: 1bfr S: [16668]
      20. 638719Domain d1bfrt_: 1bfr T: [16669]
      21. 638720Domain d1bfru_: 1bfr U: [16670]
      22. 638721Domain d1bfrv_: 1bfr V: [16671]
      23. 638722Domain d1bfrw_: 1bfr W: [16672]
      24. 638723Domain d1bfrx_: 1bfr X: [16673]
        complexed with hem, mn
    3. Domains for 2htn:
      1. 638680Domain d2htna1: 2htn A:1-158 [136753]
        automatically matched to d1bcfa_
        complexed with fe, hem
      2. 638681Domain d2htnb1: 2htn B:1-158 [136754]
        automatically matched to d1bcfa_
        complexed with fe, hem
      3. 638682Domain d2htnc1: 2htn C:1-158 [136755]
        automatically matched to d1bcfa_
        complexed with fe, hem
      4. 638683Domain d2htnd1: 2htn D:1-158 [136756]
        automatically matched to d1bcfa_
        complexed with fe, hem
      5. 638684Domain d2htne1: 2htn E:1-158 [136757]
        automatically matched to d1bcfa_
        complexed with fe, hem
      6. 638685Domain d2htnf1: 2htn F:1-158 [136758]
        automatically matched to d1bcfa_
        complexed with fe, hem
      7. 638686Domain d2htng1: 2htn G:1-158 [136759]
        automatically matched to d1bcfa_
        complexed with fe, hem
      8. 638687Domain d2htnh1: 2htn H:1-158 [136760]
        automatically matched to d1bcfa_
        complexed with fe, hem
  4. 638724Rhodobacter capsulatus [TaxId:1061] [69004] (1 PDB entry)

More info for Protein Bacterioferritin (cytochrome b1) from a.25.1.1: Ferritin

Timeline for Protein Bacterioferritin (cytochrome b1) from a.25.1.1: Ferritin: