SCOPe 2.08: Protein: Medium chain acyl-CoA dehydrogenase, C-domain

Lineage for Protein: Medium chain acyl-CoA dehydrogenase, C-domain

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.29: Bromodomain-like [47363] (15 superfamilies)
4 helices; bundle; minor mirror variant of up-and-down topology
Superfamily a.29.3: Acyl-CoA dehydrogenase C-terminal domain-like [47203] (3 families)
multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel
Family a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain [47204] (10 proteins)
Protein Medium chain acyl-CoA dehydrogenase, C-domain [47207] (3 species)

Species:

Human (Homo sapiens) [TaxId:9606] [47209] (5 PDB entries)
Uniprot P11310 34-421
1. Domains for 1egc:
  1. Domain d1egca1: 1egc A:242-396 [16600]
    Other proteins in same PDB: d1egca2, d1egcb2, d1egcc2, d1egcd2
    complexed with co8, fad; mutant
  2. Domain d1egcb1: 1egc B:242-396 [16601]
    Other proteins in same PDB: d1egca2, d1egcb2, d1egcc2, d1egcd2
    complexed with co8, fad; mutant
  3. Domain d1egcc1: 1egc C:242-396 [16602]
    Other proteins in same PDB: d1egca2, d1egcb2, d1egcc2, d1egcd2
    complexed with co8, fad; mutant
  4. Domain d1egcd1: 1egc D:242-396 [16603]
    Other proteins in same PDB: d1egca2, d1egcb2, d1egcc2, d1egcd2
    complexed with co8, fad; mutant
2. Domains for 1egd:
  1. Domain d1egda1: 1egd A:242-396 [16596]
    Other proteins in same PDB: d1egda2, d1egdb2, d1egdc2, d1egdd2
    complexed with fad; mutant
  2. Domain d1egdb1: 1egd B:242-396 [16597]
    Other proteins in same PDB: d1egda2, d1egdb2, d1egdc2, d1egdd2
    complexed with fad; mutant
  3. Domain d1egdc1: 1egd C:242-396 [16598]
    Other proteins in same PDB: d1egda2, d1egdb2, d1egdc2, d1egdd2
    complexed with fad; mutant
  4. Domain d1egdd1: 1egd D:242-396 [16599]
    Other proteins in same PDB: d1egda2, d1egdb2, d1egdc2, d1egdd2
    complexed with fad; mutant
3. Domains for 1ege:
  1. Domain d1egea1: 1ege A:242-396 [16604]
    Other proteins in same PDB: d1egea2, d1egeb2, d1egec2, d1eged2
    complexed with fad; mutant
  2. Domain d1egeb1: 1ege B:242-396 [16605]
    Other proteins in same PDB: d1egea2, d1egeb2, d1egec2, d1eged2
    complexed with fad; mutant
  3. Domain d1egec1: 1ege C:242-396 [16606]
    Other proteins in same PDB: d1egea2, d1egeb2, d1egec2, d1eged2
    complexed with fad; mutant
  4. Domain d1eged1: 1ege D:242-396 [16607]
    Other proteins in same PDB: d1egea2, d1egeb2, d1egec2, d1eged2
    complexed with fad; mutant
4. Domains for 1t9g:
  1. Domain d1t9ga1: 1t9g A:242-395 [106711]
    Other proteins in same PDB: d1t9ga2, d1t9gb2, d1t9gc2, d1t9gd2, d1t9gr_, d1t9gs_
    complexed with amp, fad
  2. Domain d1t9gb1: 1t9g B:242-395 [106713]
    Other proteins in same PDB: d1t9ga2, d1t9gb2, d1t9gc2, d1t9gd2, d1t9gr_, d1t9gs_
    complexed with amp, fad
  3. Domain d1t9gc1: 1t9g C:242-395 [106715]
    Other proteins in same PDB: d1t9ga2, d1t9gb2, d1t9gc2, d1t9gd2, d1t9gr_, d1t9gs_
    complexed with amp, fad
  4. Domain d1t9gd1: 1t9g D:242-395 [106717]
    Other proteins in same PDB: d1t9ga2, d1t9gb2, d1t9gc2, d1t9gd2, d1t9gr_, d1t9gs_
    complexed with amp, fad
5. Domains for 4p13:
  1. Domain d4p13a2: 4p13 A:242-396 [270326]
    Other proteins in same PDB: d4p13a1, d4p13b1, d4p13c1, d4p13d1
    automated match to d1egda1
    complexed with fad; mutant
  2. Domain d4p13b2: 4p13 B:242-395 [270324]
    Other proteins in same PDB: d4p13a1, d4p13b1, d4p13c1, d4p13d1
    automated match to d1egda1
    complexed with fad; mutant
  3. Domain d4p13c2: 4p13 C:242-396 [270322]
    Other proteins in same PDB: d4p13a1, d4p13b1, d4p13c1, d4p13d1
    automated match to d1egda1
    complexed with fad; mutant
  4. Domain d4p13d2: 4p13 D:242-395 [270320]
    Other proteins in same PDB: d4p13a1, d4p13b1, d4p13c1, d4p13d1
    automated match to d1egda1
    complexed with fad; mutant
Pig (Sus scrofa) [TaxId:9823] [47208] (3 PDB entries)
1. Domains for 1udy:
  1. Domain d1udya1: 1udy A:242-395 [99231]
    Other proteins in same PDB: d1udya2, d1udyb2, d1udyc2, d1udyd2
    complexed with cs8, fad
  2. Domain d1udyb1: 1udy B:242-393 [99233]
    Other proteins in same PDB: d1udya2, d1udyb2, d1udyc2, d1udyd2
    complexed with cs8, fad
  3. Domain d1udyc1: 1udy C:242-395 [99235]
    Other proteins in same PDB: d1udya2, d1udyb2, d1udyc2, d1udyd2
    complexed with cs8, fad
  4. Domain d1udyd1: 1udy D:242-395 [99237]
    Other proteins in same PDB: d1udya2, d1udyb2, d1udyc2, d1udyd2
    complexed with cs8, fad
2. Domains for 3mdd:
  1. Domain d3mdda1: 3mdd A:242-395 [16592]
    Other proteins in same PDB: d3mdda2, d3mddb2
    complexed with fad
  2. Domain d3mddb1: 3mdd B:242-395 [16593]
    Other proteins in same PDB: d3mdda2, d3mddb2
    complexed with fad
3. Domains for 3mde:
  1. Domain d3mdea1: 3mde A:242-395 [16594]
    Other proteins in same PDB: d3mdea2, d3mdeb2
    complexed with co8, fad
  2. Domain d3mdeb1: 3mde B:242-395 [16595]
    Other proteins in same PDB: d3mdea2, d3mdeb2
    complexed with co8, fad
Thermus thermophilus [TaxId:274] [116882] (1 PDB entry)
Uniprot Q5SJ70 32-409
- Domains for 1ukw:
  1. Domain d1ukwa1: 1ukw A:259-410 [113263]
    Other proteins in same PDB: d1ukwa2, d1ukwb2
    complexed with co, fad
  2. Domain d1ukwb1: 1ukw B:259-410 [113265]
    Other proteins in same PDB: d1ukwa2, d1ukwb2
    complexed with co, fad

More info for Protein Medium chain acyl-CoA dehydrogenase, C-domain from a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain

Timeline for Protein Medium chain acyl-CoA dehydrogenase, C-domain from a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain:

Protein Medium chain acyl-CoA dehydrogenase, C-domain from a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain first appeared (with stable ids) in SCOP 1.55, called Protein Medium chain acyl-CoA dehydrogenase from a.24.6.1: Acyl-CoA dehydrogenase (flavoprotein), C-terminal domain
Protein Medium chain acyl-CoA dehydrogenase, C-domain from a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain appears in SCOPe 2.07