SCOPe 2.08: Family a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain

Lineage for Family a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.3: Acyl-CoA dehydrogenase C-terminal domain-like [47203] (3 families)
   multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel

5. Family a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain [47204] (10 proteins)

Proteins:

1. 4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain [116883] (1 species)

   • Species Clostridium aminobutyricum [TaxId:33953] [116884] (1 PDB entry)
     Uniprot P55792

2. Acyl-CoA dehydrogenase [140473] (1 species)

   • Species Thermus thermophilus [TaxId:274] [140474] (3 PDB entries)
     Uniprot Q5SGZ2 235-387

3. Butyryl-CoA dehydrogenase, C-domain [47205] (2 species)

   1. Species Megasphaera elsdenii [TaxId:907] [47206] (1 PDB entry)

   2. Species Norway rat (Rattus norvegicus) [TaxId:10116] [69018] (1 PDB entry)

4. Glutaryl-CoA dehydrogenase GCDH [109794] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [109795] (3 PDB entries)
     Uniprot Q92947

5. Isobutyryl-CoA dehydrogenase [101144] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [101145] (1 PDB entry)

6. Isovaleryl-CoA dehydrogenase, C-domain [47210] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [47211] (1 PDB entry)

7. Medium chain acyl-CoA dehydrogenase, C-domain [47207] (3 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [47209] (5 PDB entries)
      Uniprot P11310 34-421

   2. Species Pig (Sus scrofa) [TaxId:9823] [47208] (3 PDB entries)

   3. Species Thermus thermophilus [TaxId:274] [116882] (1 PDB entry)
      Uniprot Q5SJ70 32-409

8. Nitroalkane oxidase [140471] (1 species)

   • Species Fungus (Fusarium oxysporum) [TaxId:5507] [140472] (2 PDB entries)
     Uniprot Q8X1D8 261-430

9. Protein FkbI [101146] (1 species)
   involved in biosynthesis of methoxymalonyl extender unit of fk520 polyketide immunosuppressant

   • Species Streptomyces hygroscopicus [TaxId:1912] [101147] (1 PDB entry)

10. automated matches [231931] (2 species)
    not a true protein

    1. Species Fungus (Fusarium oxysporum) [TaxId:5507] [231932] (6 PDB entries)

    2. Species Human (Homo sapiens) [TaxId:9606] [255575] (1 PDB entry)

More info for Family a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain

Timeline for Family a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain:

• Family a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain first appeared (with stable ids) in SCOP 1.55, called Family a.24.6.1: Acyl-CoA dehydrogenase (flavoprotein), C-terminal domain
  
• Family a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain appears in SCOPe 2.07