Lineage for Protein: Histone H2B

  1. Root: SCOP 1.63
  2. 208553Class a: All alpha proteins [46456] (171 folds)
  3. 211635Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 211636Superfamily a.22.1: Histone-fold [47113] (3 families) (S)
  5. 211637Family a.22.1.1: Nucleosome core histones [47114] (4 proteins)
    form octamers composed of two copies of each of the four histones
  6. 211667Protein Histone H2B [47119] (3 species)

Species:

  1. 211668African clawed frog (Xenopus laevis) [TaxId:8355] [47121] (8 PDB entries)
    1. Domains for 1aoi:
      1. 211681Domain d1aoid_: 1aoi D: [16452]
        Other proteins in same PDB: d1aoia_, d1aoib_, d1aoic_, d1aoie_, d1aoif_, d1aoig_
      2. 211682Domain d1aoih_: 1aoi H: [16453]
        Other proteins in same PDB: d1aoia_, d1aoib_, d1aoic_, d1aoie_, d1aoif_, d1aoig_
        protein/DNA complex; complexed with mn; mutant
    2. Domains for 1f66:
      1. 211683Domain d1f66d_: 1f66 D: [16450]
        Other proteins in same PDB: d1f66a_, d1f66b_, d1f66c_, d1f66e_, d1f66f_, d1f66g_
      2. 211684Domain d1f66h_: 1f66 H: [16451]
        Other proteins in same PDB: d1f66a_, d1f66b_, d1f66c_, d1f66e_, d1f66f_, d1f66g_
        protein/DNA complex; complexed with mn
    3. Domains for 1kx3:
      1. 211671Domain d1kx3d_: 1kx3 D: [77580]
        Other proteins in same PDB: d1kx3a_, d1kx3b_, d1kx3c_, d1kx3e_, d1kx3f_, d1kx3g_
      2. 211672Domain d1kx3h_: 1kx3 H: [77584]
        Other proteins in same PDB: d1kx3a_, d1kx3b_, d1kx3c_, d1kx3e_, d1kx3f_, d1kx3g_
        complexed with mn
    4. Domains for 1kx4:
      1. 211679Domain d1kx4d_: 1kx4 D: [77588]
        Other proteins in same PDB: d1kx4a_, d1kx4b_, d1kx4c_, d1kx4e_, d1kx4f_, d1kx4g_
      2. 211680Domain d1kx4h_: 1kx4 H: [77592]
        Other proteins in same PDB: d1kx4a_, d1kx4b_, d1kx4c_, d1kx4e_, d1kx4f_, d1kx4g_
        complexed with cl, mn
    5. Domains for 1kx5:
      1. 211669Domain d1kx5d_: 1kx5 D: [77596]
        Other proteins in same PDB: d1kx5a_, d1kx5b_, d1kx5c_, d1kx5e_, d1kx5f_, d1kx5g_
      2. 211670Domain d1kx5h_: 1kx5 H: [77600]
        Other proteins in same PDB: d1kx5a_, d1kx5b_, d1kx5c_, d1kx5e_, d1kx5f_, d1kx5g_
        complexed with cl, mn
    6. Domains for 1m18:
      1. 211675Domain d1m18d_: 1m18 D: [78374]
        Other proteins in same PDB: d1m18a_, d1m18b_, d1m18c_, d1m18e_, d1m18f_, d1m18g_
      2. 211676Domain d1m18h_: 1m18 H: [78378]
        Other proteins in same PDB: d1m18a_, d1m18b_, d1m18c_, d1m18e_, d1m18f_, d1m18g_
        complexed with abu, bal, dib, imt, mn, pyb
    7. Domains for 1m19:
      1. 211673Domain d1m19d_: 1m19 D: [78382]
        Other proteins in same PDB: d1m19a_, d1m19b_, d1m19c_, d1m19e_, d1m19f_, d1m19g_
      2. 211674Domain d1m19h_: 1m19 H: [78386]
        Other proteins in same PDB: d1m19a_, d1m19b_, d1m19c_, d1m19e_, d1m19f_, d1m19g_
        complexed with abu, bal, dib, imt, mn, pyb
    8. Domains for 1m1a:
      1. 211677Domain d1m1ad_: 1m1a D: [78390]
        Other proteins in same PDB: d1m1aa_, d1m1ab_, d1m1ac_, d1m1ae_, d1m1af_, d1m1ag_
      2. 211678Domain d1m1ah_: 1m1a H: [78394]
        Other proteins in same PDB: d1m1aa_, d1m1ab_, d1m1ac_, d1m1ae_, d1m1af_, d1m1ag_
        complexed with abu, bal, dib, imt, mn, pyb
  2. 211685Baker's yeast (Saccharomyces cerevisiae), H2B.2 [TaxId:4932] [68985] (1 PDB entry)
  3. 211688Chicken (Gallus gallus), erythrocytes [TaxId:9031] [47120] (4 PDB entries)
    1. Domains for 1eqz:
      1. 211691Domain d1eqzb_: 1eqz B: [16446]
        Other proteins in same PDB: d1eqza_, d1eqzc_, d1eqzd_, d1eqze_, d1eqzg_, d1eqzh_
      2. 211692Domain d1eqzf_: 1eqz F: [16447]
        Other proteins in same PDB: d1eqza_, d1eqzc_, d1eqzd_, d1eqze_, d1eqzg_, d1eqzh_
        protein/DNA complex; complexed with cac, cl, k, mn; mutant
    2. Domain for 1hio:
    3. Domains for 1hq3:
      1. 211689Domain d1hq3b_: 1hq3 B: [16444]
        Other proteins in same PDB: d1hq3a_, d1hq3c_, d1hq3d_, d1hq3e_, d1hq3g_, d1hq3h_
      2. 211690Domain d1hq3f_: 1hq3 F: [16445]
        Other proteins in same PDB: d1hq3a_, d1hq3c_, d1hq3d_, d1hq3e_, d1hq3g_, d1hq3h_
        complexed with cl, po4
    4. Domain for 2hio:

More info for Protein Histone H2B from a.22.1.1: Nucleosome core histones

Timeline for Protein Histone H2B from a.22.1.1: Nucleosome core histones: