Lineage for Species: African clawed frog (Xenopus laevis) [TaxId: 8355]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1986516Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 1986517Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 1986518Family a.22.1.1: Nucleosome core histones [47114] (6 protein domains)
    form octamers composed of two copies of each of the four histones
  6. 1986519Protein Histone H2A [47115] (6 species)
  7. 1986520Species African clawed frog (Xenopus laevis) [TaxId:8355] [47117] (34 PDB entries)

PDB entries in Species: African clawed frog (Xenopus laevis) [TaxId: 8355]:

  1. Domain(s) for 1aoi:
    1. 1986561Domain d1aoic_: 1aoi C: [16440]
      Other proteins in same PDB: d1aoia_, d1aoib_, d1aoid_, d1aoie_, d1aoif_, d1aoih_
      protein/DNA complex; complexed with mn
    2. 1986562Domain d1aoig_: 1aoi G: [16441]
      Other proteins in same PDB: d1aoia_, d1aoib_, d1aoid_, d1aoie_, d1aoif_, d1aoih_
      protein/DNA complex; complexed with mn
  2. Domain(s) for 1kx3:
    1. 1986525Domain d1kx3c_: 1kx3 C: [77579]
      Other proteins in same PDB: d1kx3a_, d1kx3b_, d1kx3d_, d1kx3e_, d1kx3f_, d1kx3h_
      protein/DNA complex; complexed with mn
    2. 1986526Domain d1kx3g_: 1kx3 G: [77583]
      Other proteins in same PDB: d1kx3a_, d1kx3b_, d1kx3d_, d1kx3e_, d1kx3f_, d1kx3h_
      protein/DNA complex; complexed with mn
  3. Domain(s) for 1kx4:
    1. 1986553Domain d1kx4c_: 1kx4 C: [77587]
      Other proteins in same PDB: d1kx4a_, d1kx4b_, d1kx4d_, d1kx4e_, d1kx4f_, d1kx4h_
      protein/DNA complex; complexed with cl, mn
    2. 1986554Domain d1kx4g_: 1kx4 G: [77591]
      Other proteins in same PDB: d1kx4a_, d1kx4b_, d1kx4d_, d1kx4e_, d1kx4f_, d1kx4h_
      protein/DNA complex; complexed with cl, mn
  4. Domain(s) for 1kx5:
    1. 1986521Domain d1kx5c_: 1kx5 C: [77595]
      Other proteins in same PDB: d1kx5a_, d1kx5b_, d1kx5d_, d1kx5e_, d1kx5f_, d1kx5h_
      protein/DNA complex; complexed with cl, mn
    2. 1986522Domain d1kx5g_: 1kx5 G: [77599]
      Other proteins in same PDB: d1kx5a_, d1kx5b_, d1kx5d_, d1kx5e_, d1kx5f_, d1kx5h_
      protein/DNA complex; complexed with cl, mn
  5. Domain(s) for 1m18:
    1. 1986533Domain d1m18c_: 1m18 C: [78373]
      Other proteins in same PDB: d1m18a_, d1m18b_, d1m18d_, d1m18e_, d1m18f_, d1m18h_
      protein/DNA complex; complexed with 1sz, mn
    2. 1986534Domain d1m18g_: 1m18 G: [78377]
      Other proteins in same PDB: d1m18a_, d1m18b_, d1m18d_, d1m18e_, d1m18f_, d1m18h_
      protein/DNA complex; complexed with 1sz, mn
  6. Domain(s) for 1m19:
    1. 1986529Domain d1m19c_: 1m19 C: [78381]
      Other proteins in same PDB: d1m19a_, d1m19b_, d1m19d_, d1m19e_, d1m19f_, d1m19h_
      protein/DNA complex; complexed with imt, mn
    2. 1986530Domain d1m19g_: 1m19 G: [78385]
      Other proteins in same PDB: d1m19a_, d1m19b_, d1m19d_, d1m19e_, d1m19f_, d1m19h_
      protein/DNA complex; complexed with imt, mn
  7. Domain(s) for 1m1a:
    1. 1986549Domain d1m1ac_: 1m1a C: [78389]
      Other proteins in same PDB: d1m1aa_, d1m1ab_, d1m1ad_, d1m1ae_, d1m1af_, d1m1ah_
      protein/DNA complex; complexed with imt, mn
    2. 1986550Domain d1m1ag_: 1m1a G: [78393]
      Other proteins in same PDB: d1m1aa_, d1m1ab_, d1m1ad_, d1m1ae_, d1m1af_, d1m1ah_
      protein/DNA complex; complexed with imt, mn
  8. Domain(s) for 1p34:
    1. 1986547Domain d1p34c_: 1p34 C: [93972]
      Other proteins in same PDB: d1p34a_, d1p34b_, d1p34d_, d1p34e_, d1p34f_, d1p34h_
      protein/DNA complex; mutant
    2. 1986548Domain d1p34g_: 1p34 G: [93976]
      Other proteins in same PDB: d1p34a_, d1p34b_, d1p34d_, d1p34e_, d1p34f_, d1p34h_
      protein/DNA complex; mutant
  9. Domain(s) for 1p3a:
    1. 1986563Domain d1p3ac_: 1p3a C: [93982]
      Other proteins in same PDB: d1p3aa_, d1p3ab_, d1p3ad_, d1p3ae_, d1p3af_, d1p3ah_
      protein/DNA complex; mutant
    2. 1986564Domain d1p3ag_: 1p3a G: [93986]
      Other proteins in same PDB: d1p3aa_, d1p3ab_, d1p3ad_, d1p3ae_, d1p3af_, d1p3ah_
      protein/DNA complex; mutant
  10. Domain(s) for 1p3b:
    1. 1986573Domain d1p3bc_: 1p3b C: [93990]
      Other proteins in same PDB: d1p3ba_, d1p3bb_, d1p3bd_, d1p3be_, d1p3bf_, d1p3bh_
      protein/DNA complex; mutant
    2. 1986574Domain d1p3bg_: 1p3b G: [93994]
      Other proteins in same PDB: d1p3ba_, d1p3bb_, d1p3bd_, d1p3be_, d1p3bf_, d1p3bh_
      protein/DNA complex; mutant
  11. Domain(s) for 1p3f:
    1. 1986571Domain d1p3fc_: 1p3f C: [94000]
      Other proteins in same PDB: d1p3fa_, d1p3fb_, d1p3fd_, d1p3fe_, d1p3ff_, d1p3fh_
      protein/DNA complex; mutant
    2. 1986572Domain d1p3fg_: 1p3f G: [94004]
      Other proteins in same PDB: d1p3fa_, d1p3fb_, d1p3fd_, d1p3fe_, d1p3ff_, d1p3fh_
      protein/DNA complex; mutant
  12. Domain(s) for 1p3g:
    1. 1986545Domain d1p3gc_: 1p3g C: [94008]
      Other proteins in same PDB: d1p3ga_, d1p3gb_, d1p3gd_, d1p3ge_, d1p3gf_, d1p3gh_
      protein/DNA complex; mutant
    2. 1986546Domain d1p3gg_: 1p3g G: [94012]
      Other proteins in same PDB: d1p3ga_, d1p3gb_, d1p3gd_, d1p3ge_, d1p3gf_, d1p3gh_
      protein/DNA complex; mutant
  13. Domain(s) for 1p3i:
    1. 1986531Domain d1p3ic_: 1p3i C: [94016]
      Other proteins in same PDB: d1p3ia_, d1p3ib_, d1p3id_, d1p3ie_, d1p3if_, d1p3ih_
      protein/DNA complex; mutant
    2. 1986532Domain d1p3ig_: 1p3i G: [94020]
      Other proteins in same PDB: d1p3ia_, d1p3ib_, d1p3id_, d1p3ie_, d1p3if_, d1p3ih_
      protein/DNA complex; mutant
  14. Domain(s) for 1p3k:
    1. 1986559Domain d1p3kc_: 1p3k C: [94026]
      Other proteins in same PDB: d1p3ka_, d1p3kb_, d1p3kd_, d1p3ke_, d1p3kf_, d1p3kh_
      protein/DNA complex; mutant
    2. 1986560Domain d1p3kg_: 1p3k G: [94030]
      Other proteins in same PDB: d1p3ka_, d1p3kb_, d1p3kd_, d1p3ke_, d1p3kf_, d1p3kh_
      protein/DNA complex; mutant
  15. Domain(s) for 1p3l:
    1. 1986535Domain d1p3lc_: 1p3l C: [94034]
      Other proteins in same PDB: d1p3la_, d1p3lb_, d1p3ld_, d1p3le_, d1p3lf_, d1p3lh_
      protein/DNA complex; mutant
    2. 1986536Domain d1p3lg_: 1p3l G: [94038]
      Other proteins in same PDB: d1p3la_, d1p3lb_, d1p3ld_, d1p3le_, d1p3lf_, d1p3lh_
      protein/DNA complex; mutant
  16. Domain(s) for 1p3m:
    1. 1986557Domain d1p3mc_: 1p3m C: [94042]
      Other proteins in same PDB: d1p3ma_, d1p3mb_, d1p3md_, d1p3me_, d1p3mf_, d1p3mh_
      protein/DNA complex; mutant
    2. 1986558Domain d1p3mg_: 1p3m G: [94046]
      Other proteins in same PDB: d1p3ma_, d1p3mb_, d1p3md_, d1p3me_, d1p3mf_, d1p3mh_
      protein/DNA complex; mutant
  17. Domain(s) for 1p3o:
    1. 1986541Domain d1p3oc_: 1p3o C: [94051]
      Other proteins in same PDB: d1p3oa_, d1p3ob_, d1p3od_, d1p3oe_, d1p3of_, d1p3oh_
      protein/DNA complex; mutant
    2. 1986542Domain d1p3og_: 1p3o G: [94055]
      Other proteins in same PDB: d1p3oa_, d1p3ob_, d1p3od_, d1p3oe_, d1p3of_, d1p3oh_
      protein/DNA complex; mutant
  18. Domain(s) for 1p3p:
    1. 1986539Domain d1p3pc_: 1p3p C: [94059]
      Other proteins in same PDB: d1p3pa_, d1p3pb_, d1p3pd_, d1p3pe_, d1p3pf_, d1p3ph_
      protein/DNA complex; mutant
    2. 1986540Domain d1p3pg_: 1p3p G: [94063]
      Other proteins in same PDB: d1p3pa_, d1p3pb_, d1p3pd_, d1p3pe_, d1p3pf_, d1p3ph_
      protein/DNA complex; mutant
  19. Domain(s) for 1s32:
    1. 1986523Domain d1s32c_: 1s32 C: [98414]
      Other proteins in same PDB: d1s32a_, d1s32b_, d1s32d_, d1s32e_, d1s32f_, d1s32h_
      protein/DNA complex; complexed with cl, imt, mn, ogg
    2. 1986524Domain d1s32g_: 1s32 G: [98418]
      Other proteins in same PDB: d1s32a_, d1s32b_, d1s32d_, d1s32e_, d1s32f_, d1s32h_
      protein/DNA complex; complexed with cl, imt, mn, ogg
  20. Domain(s) for 1zla:
    1. 1986569Domain d1zlac1: 1zla C:814-920 [125242]
      Other proteins in same PDB: d1zlaa_, d1zlab_, d1zlad_, d1zlae_, d1zlaf_, d1zlah_
      protein/DNA complex
    2. 1986570Domain d1zlag_: 1zla G: [125246]
      Other proteins in same PDB: d1zlaa_, d1zlab_, d1zlad_, d1zlae_, d1zlaf_, d1zlah_
      automated match to d1kx5c_
      protein/DNA complex
  21. Domain(s) for 2nzd:
    1. 1986551Domain d2nzdc_: 2nzd C: [138850]
      Other proteins in same PDB: d2nzda_, d2nzdb_, d2nzdd_, d2nzde_, d2nzdf_, d2nzdh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with mn
    2. 1986552Domain d2nzdg_: 2nzd G: [138853]
      Other proteins in same PDB: d2nzda_, d2nzdb_, d2nzdd_, d2nzde_, d2nzdf_, d2nzdh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with mn
  22. Domain(s) for 3b6f:
    1. 1986587Domain d3b6fc1: 3b6f C:15-118 [154886]
      Other proteins in same PDB: d3b6fa1, d3b6fb1, d3b6fd1, d3b6fe1, d3b6ff1, d3b6fh1
      automatically matched to d1aoic_
      protein/DNA complex; complexed with mn
    2. 1986588Domain d3b6fg1: 3b6f G:15-118 [154890]
      Other proteins in same PDB: d3b6fa1, d3b6fb1, d3b6fd1, d3b6fe1, d3b6ff1, d3b6fh1
      automatically matched to d1aoic_
      protein/DNA complex; complexed with mn
  23. Domain(s) for 3b6g:
    1. 1986589Domain d3b6gc1: 3b6g C:15-118 [154894]
      Other proteins in same PDB: d3b6ga1, d3b6gb1, d3b6gd1, d3b6ge1, d3b6gf1, d3b6gh1
      automatically matched to d1aoic_
      protein/DNA complex; complexed with mn
    2. 1986590Domain d3b6gg1: 3b6g G:15-118 [154898]
      Other proteins in same PDB: d3b6ga1, d3b6gb1, d3b6gd1, d3b6ge1, d3b6gf1, d3b6gh1
      automatically matched to d1aoic_
      protein/DNA complex; complexed with mn
  24. Domain(s) for 3c1b:
    1. 1986527Domain d3c1bc_: 3c1b C: [155853]
      Other proteins in same PDB: d3c1ba_, d3c1bb_, d3c1bd_, d3c1be_, d3c1bf_, d3c1bh_
      automated match to d1kx5c_
      protein/DNA complex
    2. 1986528Domain d3c1bg_: 3c1b G: [155857]
      Other proteins in same PDB: d3c1ba_, d3c1bb_, d3c1bd_, d3c1be_, d3c1bf_, d3c1bh_
      automated match to d1kx5c_
      protein/DNA complex
  25. Domain(s) for 3c1c:
    1. 1986583Domain d3c1cc1: 3c1c C:814-918 [155860]
      Other proteins in same PDB: d3c1cb1, d3c1cd1, d3c1cf1, d3c1ch1
      automatically matched to d1aoic_
      protein/DNA complex
    2. 1986584Domain d3c1cg1: 3c1c G:1016-1118 [155863]
      Other proteins in same PDB: d3c1cb1, d3c1cd1, d3c1cf1, d3c1ch1
      automatically matched to d1aoic_
      protein/DNA complex
  26. Domain(s) for 3kuy:
    1. 1986577Domain d3kuyc_: 3kuy C: [179729]
      Other proteins in same PDB: d3kuya_, d3kuyb_, d3kuyd_, d3kuye_, d3kuyf_, d3kuyh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with atv, mn
    2. 1986578Domain d3kuyg_: 3kuy G: [179731]
      Other proteins in same PDB: d3kuya_, d3kuyb_, d3kuyd_, d3kuye_, d3kuyf_, d3kuyh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with atv, mn
  27. Domain(s) for 3lel:
    1. 1986579Domain d3lelc_: 3lel C: [191755]
      Other proteins in same PDB: d3lela_, d3lelb_, d3leld_, d3lele_, d3lelf_, d3lelh_, d3lelk_, d3lell_, d3leln_, d3lelo_, d3lelp_, d3lelr_
      automated match to d1kx5c_
      protein/DNA complex; complexed with mn
    2. 1986580Domain d3lelg_: 3lel G: [191758]
      Other proteins in same PDB: d3lela_, d3lelb_, d3leld_, d3lele_, d3lelf_, d3lelh_, d3lelk_, d3lell_, d3leln_, d3lelo_, d3lelp_, d3lelr_
      automated match to d1kx5c_
      protein/DNA complex; complexed with mn
    3. 1986581Domain d3lelm_: 3lel M: [191761]
      Other proteins in same PDB: d3lela_, d3lelb_, d3leld_, d3lele_, d3lelf_, d3lelh_, d3lelk_, d3lell_, d3leln_, d3lelo_, d3lelp_, d3lelr_
      automated match to d1kx5c_
      protein/DNA complex; complexed with mn
    4. 1986582Domain d3lelq_: 3lel Q: [191764]
      Other proteins in same PDB: d3lela_, d3lelb_, d3leld_, d3lele_, d3lelf_, d3lelh_, d3lelk_, d3lell_, d3leln_, d3lelo_, d3lelp_, d3lelr_
      automated match to d1kx5c_
      protein/DNA complex; complexed with mn
  28. Domain(s) for 3lz0:
    1. 1986565Domain d3lz0c_: 3lz0 C: [180644]
      Other proteins in same PDB: d3lz0a_, d3lz0e_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, mn
    2. 1986566Domain d3lz0g_: 3lz0 G: [180646]
      Other proteins in same PDB: d3lz0a_, d3lz0e_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, mn
  29. Domain(s) for 3lz1:
    1. 1986567Domain d3lz1c_: 3lz1 C: [180648]
      Other proteins in same PDB: d3lz1a_, d3lz1e_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, mn
    2. 1986568Domain d3lz1g_: 3lz1 G: [180650]
      Other proteins in same PDB: d3lz1a_, d3lz1e_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, mn
  30. Domain(s) for 3mgp:
    1. 1986575Domain d3mgpc_: 3mgp C: [181194]
      Other proteins in same PDB: d3mgpa_, d3mgpb_, d3mgpd_, d3mgpe_, d3mgpf_, d3mgph_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, co
    2. 1986576Domain d3mgpg_: 3mgp G: [181196]
      Other proteins in same PDB: d3mgpa_, d3mgpb_, d3mgpd_, d3mgpe_, d3mgpf_, d3mgph_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, co
  31. Domain(s) for 3mgq:
    1. 1986585Domain d3mgqc_: 3mgq C: [181198]
      Other proteins in same PDB: d3mgqa_, d3mgqb_, d3mgqd_, d3mgqe_, d3mgqf_, d3mgqh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, ni
    2. 1986586Domain d3mgqg_: 3mgq G: [181200]
      Other proteins in same PDB: d3mgqa_, d3mgqb_, d3mgqd_, d3mgqe_, d3mgqf_, d3mgqh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, ni
  32. Domain(s) for 3mgr:
    1. 1986555Domain d3mgrc_: 3mgr C: [181202]
      Other proteins in same PDB: d3mgra_, d3mgrb_, d3mgrd_, d3mgre_, d3mgrf_, d3mgrh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, mn, rb
    2. 1986556Domain d3mgrg_: 3mgr G: [181204]
      Other proteins in same PDB: d3mgra_, d3mgrb_, d3mgrd_, d3mgre_, d3mgrf_, d3mgrh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with cl, mn, rb
  33. Domain(s) for 3mnn:
    1. 1986543Domain d3mnnc_: 3mnn C: [181452]
      Other proteins in same PDB: d3mnna_, d3mnnb_, d3mnnd_, d3mnne_, d3mnnf_, d3mnnh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with mg, mml, ptw, ru, so4
    2. 1986544Domain d3mnng_: 3mnn G: [181454]
      Other proteins in same PDB: d3mnna_, d3mnnb_, d3mnnd_, d3mnne_, d3mnnf_, d3mnnh_
      automated match to d1kx5c_
      protein/DNA complex; complexed with mg, mml, ptw, ru, so4
  34. Domain(s) for 3mvd:
    1. 1986537Domain d3mvdc_: 3mvd C: [199898]
      Other proteins in same PDB: d3mvda_, d3mvdb_, d3mvdd_, d3mvde_, d3mvdf_, d3mvdh_
      automated match to d1eqza_
      protein/DNA complex
    2. 1986538Domain d3mvdg_: 3mvd G: [199899]
      Other proteins in same PDB: d3mvda_, d3mvdb_, d3mvdd_, d3mvde_, d3mvdf_, d3mvdh_
      automated match to d1eqza_
      protein/DNA complex

More info for Species African clawed frog (Xenopus laevis) [TaxId:8355] from a.22.1.1 Histone H2A

Timeline for Species African clawed frog (Xenopus laevis) [TaxId:8355] from a.22.1.1 Histone H2A: