SCOP 1.73: Protein: Domains B1 and B5 of PheRS-beta, PheT

Lineage for Protein: Domains B1 and B5 of PheRS-beta, PheT

Root: SCOP 1.73
Class a: All alpha proteins [46456] (258 folds)
Fold a.6: Putative DNA-binding domain [46954] (1 superfamily)
core: 3 helices; architecture is similar to that of the "winged helix" fold but topology is different
Superfamily a.6.1: Putative DNA-binding domain [46955] (7 families)
Family a.6.1.1: Domains B1 and B5 of PheRS-beta, PheT [46956] (1 protein)
duplication: contains two such domains related by pseudo dyad
Protein Domains B1 and B5 of PheRS-beta, PheT [46957] (1 species)

Species:

Thermus thermophilus [TaxId:274] [46958] (9 PDB entries)
identical sequence to Thermus aquaticus, TaxId: 271
1. Domains for 1b70:
  1. Domain d1b70b1: 1b70 B:1-38,B:152-190 [16303]
    Other proteins in same PDB: d1b70a_, d1b70b3, d1b70b4, d1b70b5, d1b70b6
  2. Domain d1b70b2: 1b70 B:400-474 [16304]
    Other proteins in same PDB: d1b70a_, d1b70b3, d1b70b4, d1b70b5, d1b70b6
2. Domains for 1b7y:
  1. Domain d1b7yb1: 1b7y B:1-38,B:152-190 [16301]
    Other proteins in same PDB: d1b7ya_, d1b7yb3, d1b7yb4, d1b7yb5, d1b7yb6
  2. Domain d1b7yb2: 1b7y B:400-474 [16302]
    Other proteins in same PDB: d1b7ya_, d1b7yb3, d1b7yb4, d1b7yb5, d1b7yb6
3. Domains for 1eiy:
  1. Domain d1eiyb1: 1eiy B:1-38,B:152-190 [16305]
    Other proteins in same PDB: d1eiya1, d1eiya2, d1eiyb3, d1eiyb4, d1eiyb5, d1eiyb6
  2. Domain d1eiyb2: 1eiy B:400-474 [16306]
    Other proteins in same PDB: d1eiya1, d1eiya2, d1eiyb3, d1eiyb4, d1eiyb5, d1eiyb6
4. Domains for 1jjc:
  1. Domain d1jjcb1: 1jjc B:1-38,B:152-190 [66759]
    Other proteins in same PDB: d1jjca_, d1jjcb3, d1jjcb4, d1jjcb5, d1jjcb6
  2. Domain d1jjcb2: 1jjc B:400-474 [66760]
    Other proteins in same PDB: d1jjca_, d1jjcb3, d1jjcb4, d1jjcb5, d1jjcb6
    complexed with fa5, mn, so4
5. Domains for 1pys:
  1. Domain d1pysb1: 1pys B:1-38,B:152-190 [16299]
    Other proteins in same PDB: d1pysa_, d1pysb3, d1pysb4, d1pysb5, d1pysb6
  2. Domain d1pysb2: 1pys B:400-474 [16300]
    Other proteins in same PDB: d1pysa_, d1pysb3, d1pysb4, d1pysb5, d1pysb6
    complexed with mg
6. Domains for 2akw:
  1. Domain d2akwb1: 2akw B:1-38,B:152-190 [126938]
    Other proteins in same PDB: d2akwa1, d2akwb3, d2akwb4, d2akwb5, d2akwb6
    automatically matched to d1b70b1
    complexed with 200, mn, so4
  2. Domain d2akwb2: 2akw B:400-474 [126939]
    Other proteins in same PDB: d2akwa1, d2akwb3, d2akwb4, d2akwb5, d2akwb6
    automatically matched to d1b70b2
    complexed with 200, mn, so4
7. Domains for 2aly:
  1. Domain d2alyb1: 2aly B:1-38,B:152-190 [126988]
    Other proteins in same PDB: d2alya1, d2alyb3, d2alyb4, d2alyb5, d2alyb6
    automatically matched to d1b70b1
    complexed with mn, so4, ysa
  2. Domain d2alyb2: 2aly B:400-474 [126989]
    Other proteins in same PDB: d2alya1, d2alyb3, d2alyb4, d2alyb5, d2alyb6
    automatically matched to d1b70b2
    complexed with mn, so4, ysa
8. Domains for 2amc:
  1. Domain d2amcb1: 2amc B:1-38,B:152-190 [127003]
    Other proteins in same PDB: d2amca1, d2amcb3, d2amcb4, d2amcb5, d2amcb6
    automatically matched to d1b70b1
    complexed with mg, so4, tyr
  2. Domain d2amcb2: 2amc B:400-474 [127004]
    Other proteins in same PDB: d2amca1, d2amcb3, d2amcb4, d2amcb5, d2amcb6
    automatically matched to d1b70b2
    complexed with mg, so4, tyr
9. Domains for 2iy5:
  1. Domain d2iy5b1: 2iy5 B:1-38,B:152-190 [137794]
    Other proteins in same PDB: d2iy5a1, d2iy5a2, d2iy5b3, d2iy5b4, d2iy5b5, d2iy5b6
    automatically matched to d1b70b1
    complexed with fya, mg
  2. Domain d2iy5b2: 2iy5 B:400-474 [137795]
    Other proteins in same PDB: d2iy5a1, d2iy5a2, d2iy5b3, d2iy5b4, d2iy5b5, d2iy5b6
    automatically matched to d1b70b2
    complexed with fya, mg

More info for Protein Domains B1 and B5 of PheRS-beta, PheT from a.6.1.1: Domains B1 and B5 of PheRS-beta, PheT

Timeline for Protein Domains B1 and B5 of PheRS-beta, PheT from a.6.1.1: Domains B1 and B5 of PheRS-beta, PheT:

Protein Domains B1 and B5 of PheRS-beta, PheT from a.6.1.1: Domains B1 and B5 of PheRS-beta, PheT first appeared (with stable ids) in SCOP 1.55
Protein Domains B1 and B5 of PheRS-beta, PheT from a.6.1.1: Domains B1 and B5 of PheRS-beta, PheT appears in SCOP 1.71
Protein Domains B1 and B5 of PheRS-beta, PheT from a.6.1.1: Domains B1 and B5 of PheRS-beta, PheT appears in SCOP 1.75
Protein Domains B1 and B5 of PheRS-beta, PheT from a.6.1.1: Domains B1 and B5 of PheRS-beta, PheT appears in the current release, SCOPe 2.08