Lineage for Protein: RNA polymerase subunit RPB10

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2304501Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 2308073Superfamily a.4.11: RNA polymerase subunit RPB10 [46924] (1 family) (S)
    automatically mapped to Pfam PF01194
  5. 2308074Family a.4.11.1: RNA polymerase subunit RPB10 [46925] (2 protein domains)
    Zn-binding site is near the N-terminus
  6. 2308075Protein RNA polymerase subunit RPB10 [46926] (3 species)

Species:

  1. 2308076Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [63490] (29 PDB entries)
    Uniprot P22139; part of multichain biological unit
    1. Domain for 1i3q:
    2. Domain for 1i50:
    3. Domain for 1i6h:
    4. Domain for 1k83:
    5. Domain for 1twa:
    6. Domain for 1twc:
    7. Domain for 1twf:
    8. Domain for 1twg:
    9. Domain for 1twh:
    10. Domain for 2b63:
    11. Domain for 2b8k:
    12. Domain for 2e2h:
    13. Domain for 2e2i:
    14. Domain for 2e2j:
    15. Domain for 2ja5:
    16. Domain for 2ja6:
    17. Domains for 2ja7:
      1. 2308098Domain d2ja7j1: 2ja7 J:1-65 [138203]
        Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7w1, d2ja7x1
        automatically matched to d1i3qj_
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
      2. 2308099Domain d2ja7v1: 2ja7 V:1-65 [138219]
        Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7w1, d2ja7x1
        automatically matched to d1i3qj_
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
    18. Domain for 2ja8:
    19. Domain for 2nvt:
    20. Domain for 2nvx:
    21. Domain for 2nvy:
    22. Domain for 2nvz:
    23. Domain for 2r7z:
    24. Domain for 2r92:
    25. Domain for 2r93:
    26. Domain for 2vum:
    27. Domain for 2yu9:
    28. Domains for 4c2m:
      1. 2308083Domain d4c2mj_: 4c2m J: [228428]
        Other proteins in same PDB: d4c2m1_, d4c2m2_, d4c2m3_, d4c2ma_, d4c2mb_, d4c2mc1, d4c2mc2, d4c2me1, d4c2me2, d4c2mf_, d4c2mg1, d4c2mh_, d4c2mi1, d4c2mi2, d4c2mk_, d4c2ml_, d4c2mm_, d4c2mn_, d4c2mp_, d4c2mq_, d4c2mr1, d4c2mr2, d4c2mt1, d4c2mt2, d4c2mu_, d4c2mv1, d4c2mw_, d4c2mx1, d4c2mx2, d4c2mz_
        automated match to d1twfj_
        complexed with so4, zn
      2. 2308084Domain d4c2my_: 4c2m Y: [228433]
        Other proteins in same PDB: d4c2m1_, d4c2m2_, d4c2m3_, d4c2ma_, d4c2mb_, d4c2mc1, d4c2mc2, d4c2me1, d4c2me2, d4c2mf_, d4c2mg1, d4c2mh_, d4c2mi1, d4c2mi2, d4c2mk_, d4c2ml_, d4c2mm_, d4c2mn_, d4c2mp_, d4c2mq_, d4c2mr1, d4c2mr2, d4c2mt1, d4c2mt2, d4c2mu_, d4c2mv1, d4c2mw_, d4c2mx1, d4c2mx2, d4c2mz_
        automated match to d1twfj_
        complexed with so4, zn
    29. Domain for 4c3h:
  2. 2308108Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [224845] (1 PDB entry)
  3. 2308110Methanobacterium thermoautotrophicum [TaxId:145262] [46927] (1 PDB entry)

More info for Protein RNA polymerase subunit RPB10 from a.4.11.1: RNA polymerase subunit RPB10

Timeline for Protein RNA polymerase subunit RPB10 from a.4.11.1: RNA polymerase subunit RPB10: