SCOPe 2.07: Protein: N-terminal Zn binding domain of HIV integrase

Lineage for Protein: N-terminal Zn binding domain of HIV integrase

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.10: N-terminal Zn binding domain of HIV integrase [46919] (2 families)
Family a.4.10.1: N-terminal Zn binding domain of HIV integrase [46920] (1 protein)
Zn-binding site is near the C-terminus
Protein N-terminal Zn binding domain of HIV integrase [46921] (2 species)

Species:

Human immunodeficiency virus type 1 [TaxId:11676] [46922] (8 PDB entries)
1. Domains for 1k6y:
  1. Domain d1k6ya1: 1k6y A:1-46 [68239]
    Other proteins in same PDB: d1k6ya2, d1k6yb2, d1k6yc2, d1k6yd2
    complexed with k, po4, zn
  2. Domain d1k6yb1: 1k6y B:1-46 [68241]
    Other proteins in same PDB: d1k6ya2, d1k6yb2, d1k6yc2, d1k6yd2
    complexed with k, po4, zn
  3. Domain d1k6yc1: 1k6y C:1-46 [68243]
    Other proteins in same PDB: d1k6ya2, d1k6yb2, d1k6yc2, d1k6yd2
    complexed with k, po4, zn
  4. Domain d1k6yd1: 1k6y D:1-46 [68245]
    Other proteins in same PDB: d1k6ya2, d1k6yb2, d1k6yc2, d1k6yd2
    complexed with k, po4, zn
2. Domains for 1wja:
  1. Domain d1wjaa_: 1wja A: [16259]
    complexed with zn
  2. Domain d1wjab_: 1wja B: [16260]
    complexed with zn
3. Domains for 1wjb:
  1. Domain d1wjba_: 1wjb A: [16265]
    complexed with zn
  2. Domain d1wjbb_: 1wjb B: [16266]
    complexed with zn
4. Domains for 1wjc:
  1. Domain d1wjca_: 1wjc A: [16261]
    complexed with zn
  2. Domain d1wjcb_: 1wjc B: [16262]
    complexed with zn
5. Domains for 1wjd:
  1. Domain d1wjda_: 1wjd A: [16269]
    complexed with zn
  2. Domain d1wjdb_: 1wjd B: [16270]
    complexed with zn
6. Domains for 1wje:
  1. Domain d1wjea_: 1wje A: [16263]
    complexed with cd; mutant
  2. Domain d1wjeb_: 1wje B: [16264]
    complexed with cd; mutant
7. Domains for 1wjf:
  1. Domain d1wjfa_: 1wjf A: [16267]
    complexed with cd; mutant
  2. Domain d1wjfb_: 1wjf B: [16268]
    complexed with cd; mutant
8. Domains for 6vrg:
  1. Domain d6vrga1: 6vrg A:1-45 [392786]
    Other proteins in same PDB: d6vrga2, d6vrgb2, d6vrgc2, d6vrgd2
    automated match to d1k6yb1
    complexed with k, po4, zn
  2. Domain d6vrgb1: 6vrg B:1-45 [392795]
    Other proteins in same PDB: d6vrga2, d6vrgb2, d6vrgc2, d6vrgd2
    automated match to d1k6ya1
    complexed with k, po4, zn
  3. Domain d6vrgc1: 6vrg C:1-45 [392807]
    Other proteins in same PDB: d6vrga2, d6vrgb2, d6vrgc2, d6vrgd2
    automated match to d1k6ya1
    complexed with k, po4, zn
  4. Domain d6vrgd1: 6vrg D:1-45 [392819]
    Other proteins in same PDB: d6vrga2, d6vrgb2, d6vrgc2, d6vrgd2
    automated match to d1k6ya1
    complexed with k, po4, zn
Human immunodeficiency virus type 2 [TaxId:11709] [46923] (2 PDB entries)
1. Domain for 1aub:
  - Domain d1auba_: 1aub A: [302202]
    automated match to d1e0ea_
    complexed with zn
2. Domains for 1e0e:
  1. Domain d1e0ea_: 1e0e A: [59147]
    complexed with zn
  2. Domain d1e0eb_: 1e0e B: [59148]
    complexed with zn

More info for Protein N-terminal Zn binding domain of HIV integrase from a.4.10.1: N-terminal Zn binding domain of HIV integrase

Timeline for Protein N-terminal Zn binding domain of HIV integrase from a.4.10.1: N-terminal Zn binding domain of HIV integrase:

Protein N-terminal Zn binding domain of HIV integrase from a.4.10.1: N-terminal Zn binding domain of HIV integrase first appeared (with stable ids) in SCOP 1.55
Protein N-terminal Zn binding domain of HIV integrase from a.4.10.1: N-terminal Zn binding domain of HIV integrase appears in SCOPe 2.06
Protein N-terminal Zn binding domain of HIV integrase from a.4.10.1: N-terminal Zn binding domain of HIV integrase appears in the current release, SCOPe 2.08, called Protein N-terminal Zn binding domain of HIV integrase from a.4.10.1: HIV/SIV integrase, N-terminal Zn binding domain