SCOPe 2.07: Protein: Nitrate/nitrite response regulator (NarL)

Lineage for Protein: Nitrate/nitrite response regulator (NarL)

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.6: C-terminal effector domain of the bipartite response regulators [46894] (4 families)
binds to DNA and RNA polymerase; the N-terminal, receiver domain belongs to the CheY family
Family a.4.6.2: GerE-like (LuxR/UhpA family of transcriptional regulators) [46900] (5 proteins)
contains additional, fourth helix in the C-terminal extension
Protein Nitrate/nitrite response regulator (NarL) [46901] (1 species)

Species:

Escherichia coli [TaxId:562] [46902] (5 PDB entries)
1. Domains for 1a04:
  1. Domain d1a04a1: 1a04 A:150-216 [16234]
    Other proteins in same PDB: d1a04a2, d1a04b2
  2. Domain d1a04b1: 1a04 B:150-216 [16235]
    Other proteins in same PDB: d1a04a2, d1a04b2
2. Domains for 1je8:
  1. Domain d1je8a_: 1je8 A: [77108]
    C-domain only
    protein/DNA complex; complexed with so4
  2. Domain d1je8b_: 1je8 B: [77109]
    C-domain only
    protein/DNA complex; complexed with so4
  3. Domain d1je8e_: 1je8 E: [77110]
    C-domain only
    protein/DNA complex; complexed with so4
  4. Domain d1je8f_: 1je8 F: [77111]
    C-domain only
    protein/DNA complex; complexed with so4
3. Domain for 1rnl:
  - Domain d1rnla1: 1rnl A:155-216 [16236]
    Other proteins in same PDB: d1rnla2
    complexed with gol, pt
4. Domains for 1zg1:
  1. Domain d1zg1a1: 1zg1 A:151-216 [125005]
    automatically matched to d1a04a1
    protein/DNA complex; complexed with so4
  2. Domain d1zg1b1: 1zg1 B:151-216 [125006]
    automatically matched to d1a04a1
    protein/DNA complex; complexed with so4
  3. Domain d1zg1e1: 1zg1 E:151-216 [125007]
    automatically matched to d1a04a1
    protein/DNA complex; complexed with so4
  4. Domain d1zg1f1: 1zg1 F:151-216 [125008]
    automatically matched to d1a04a1
    protein/DNA complex; complexed with so4
5. Domains for 1zg5:
  1. Domain d1zg5a1: 1zg5 A:151-216 [125010]
    automatically matched to d1a04a1
    protein/DNA complex; complexed with so4
  2. Domain d1zg5b1: 1zg5 B:151-216 [125011]
    automatically matched to d1a04a1
    protein/DNA complex; complexed with so4
  3. Domain d1zg5e1: 1zg5 E:151-216 [125012]
    automatically matched to d1a04a1
    protein/DNA complex; complexed with so4
  4. Domain d1zg5f1: 1zg5 F:151-216 [125013]
    automatically matched to d1a04a1
    protein/DNA complex; complexed with so4

More info for Protein Nitrate/nitrite response regulator (NarL) from a.4.6.2: GerE-like (LuxR/UhpA family of transcriptional regulators)

Timeline for Protein Nitrate/nitrite response regulator (NarL) from a.4.6.2: GerE-like (LuxR/UhpA family of transcriptional regulators):

Protein Nitrate/nitrite response regulator (NarL) from a.4.6.2: GerE-like (LuxR/UhpA family of transcriptional regulators) first appeared (with stable ids) in SCOP 1.55, called Protein Nitrate/nitrite response regulator (NARL) from a.4.6.2: Nitrate/nitrite response regulator (NARL)
Protein Nitrate/nitrite response regulator (NarL) from a.4.6.2: GerE-like (LuxR/UhpA family of transcriptional regulators) appears in SCOPe 2.06
Protein Nitrate/nitrite response regulator (NarL) from a.4.6.2: GerE-like (LuxR/UhpA family of transcriptional regulators) appears in the current release, SCOPe 2.08