SCOPe 2.08: Family a.4.5.11: Helicase DNA-binding domain

Lineage for Family a.4.5.11: Helicase DNA-binding domain

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.11: Helicase DNA-binding domain [46819] (4 proteins)
   follows the extended AAA-ATPase domain

Proteins:

1. CDC6, C-terminal domain [46822] (1 species)
   contains the N- and C-terminal helical extensions to the common fold

   • Species Pyrobaculum aerophilum [TaxId:13773] [46823] (1 PDB entry)

2. CDC6-like protein APE0152, C-terminal domain [116788] (1 species)

   • Species Aeropyrum pernix [TaxId:56636] [116789] (2 PDB entries)
     Uniprot Q9YFU8

3. Holliday junction helicase RuvB [46820] (2 species)

   1. Species Thermotoga maritima [TaxId:2336] [63474] (6 PDB entries)

   2. Species Thermus thermophilus [TaxId:274] [46821] (3 PDB entries)

4. Hypothetical protein SSO1545, C-terminal domain [140261] (1 species)

   • Species Sulfolobus solfataricus [TaxId:2287] [140262] (1 PDB entry)
     Uniprot Q97Y08 284-356

More info for Family a.4.5.11: Helicase DNA-binding domain

Timeline for Family a.4.5.11: Helicase DNA-binding domain:

• Family a.4.5.11: Helicase DNA-binding domain first appeared (with stable ids) in SCOP 1.55
  
• Family a.4.5.11: Helicase DNA-binding domain appears in SCOPe 2.07