Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1982239Family a.4.5.4: CAP C-terminal domain-like [46796] (9 protein domains)
  6. 1982240Protein Catabolite gene activator protein (CAP), C-terminal domain [46797] (1 species)
    N-terminal domain has double beta-helix fold
  7. 1982241Species Escherichia coli [TaxId:562] [46798] (27 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1cgp:
    1. 1982287Domain d1cgpa1: 1cgp A:138-205 [16096]
      Other proteins in same PDB: d1cgpa2, d1cgpb2
      protein/DNA complex; complexed with cmp
    2. 1982288Domain d1cgpb1: 1cgp B:138-205 [16097]
      Other proteins in same PDB: d1cgpa2, d1cgpb2
      protein/DNA complex; complexed with cmp
  2. Domain(s) for 1dbc:
    1. 1982289Domain d1dbca4: 1dbc A:138-207 [302319]
      Other proteins in same PDB: d1dbca3, d1dbcb3
      automated match to d1o3ra1
      protein/DNA complex; complexed with cmp
    2. 1982290Domain d1dbcb4: 1dbc B:138-205 [302321]
      Other proteins in same PDB: d1dbca3, d1dbcb3
      automated match to d1o3ra1
      protein/DNA complex; complexed with cmp
  3. Domain(s) for 1g6n:
    1. 1982252Domain d1g6na1: 1g6n A:138-206 [16100]
      Other proteins in same PDB: d1g6na2, d1g6nb2
      complexed with cmp
    2. 1982253Domain d1g6nb1: 1g6n B:438-507 [16101]
      Other proteins in same PDB: d1g6na2, d1g6nb2
      complexed with cmp
  4. Domain(s) for 1hw5:
    1. 1982248Domain d1hw5a1: 1hw5 A:138-208 [16098]
      Other proteins in same PDB: d1hw5a2, d1hw5b2
      complexed with cmp
    2. 1982249Domain d1hw5b1: 1hw5 B:138-205 [16099]
      Other proteins in same PDB: d1hw5a2, d1hw5b2
      complexed with cmp
  5. Domain(s) for 1i5z:
    1. 1982246Domain d1i5za1: 1i5z A:138-206 [83669]
      Other proteins in same PDB: d1i5za2, d1i5zb2
      complexed with cmp, trs
    2. 1982247Domain d1i5zb1: 1i5z B:138-207 [83671]
      Other proteins in same PDB: d1i5za2, d1i5zb2
      complexed with cmp, trs
  6. Domain(s) for 1i6x:
    1. 1982256Domain d1i6xa1: 1i6x A:138-206 [83673]
      Other proteins in same PDB: d1i6xa2, d1i6xb2
      complexed with cmp, trs; mutant
    2. 1982257Domain d1i6xb1: 1i6x B:138-207 [83675]
      Other proteins in same PDB: d1i6xa2, d1i6xb2
      complexed with cmp, trs; mutant
  7. Domain(s) for 1j59:
    1. 1982271Domain d1j59a1: 1j59 A:138-207 [71532]
      Other proteins in same PDB: d1j59a2, d1j59b2
      protein/DNA complex; complexed with cmp
    2. 1982272Domain d1j59b1: 1j59 B:138-205 [71534]
      Other proteins in same PDB: d1j59a2, d1j59b2
      protein/DNA complex; complexed with cmp
  8. Domain(s) for 1lb2:
  9. Domain(s) for 1o3q:
  10. Domain(s) for 1o3r:
  11. Domain(s) for 1o3s:
  12. Domain(s) for 1o3t:
    1. 1982292Domain d1o3ta1: 1o3t A:138-207 [86611]
      Other proteins in same PDB: d1o3ta2, d1o3tb2
      protein/DNA complex; complexed with cmp
    2. 1982293Domain d1o3tb1: 1o3t B:138-205 [86613]
      Other proteins in same PDB: d1o3ta2, d1o3tb2
      protein/DNA complex; complexed with cmp
  13. Domain(s) for 1run:
    1. 1982274Domain d1runa1: 1run A:138-209 [16103]
      Other proteins in same PDB: d1runa2, d1runb2
      protein/DNA complex; complexed with cmp
    2. 1982275Domain d1runb1: 1run B:138-205 [16104]
      Other proteins in same PDB: d1runa2, d1runb2
      protein/DNA complex; complexed with cmp
  14. Domain(s) for 1ruo:
    1. 1982282Domain d1ruoa1: 1ruo A:138-206 [16105]
      Other proteins in same PDB: d1ruoa2, d1ruob2
      protein/DNA complex; complexed with cmp; mutant
    2. 1982283Domain d1ruob1: 1ruo B:138-209 [16106]
      Other proteins in same PDB: d1ruoa2, d1ruob2
      protein/DNA complex; complexed with cmp; mutant
  15. Domain(s) for 1zrc:
    1. 1982280Domain d1zrca1: 1zrc A:138-207 [125531]
      Other proteins in same PDB: d1zrca2, d1zrcb2
      automated match to d1i5zb1
      protein/DNA complex; complexed with cmp
    2. 1982281Domain d1zrcb1: 1zrc B:138-207 [125533]
      Other proteins in same PDB: d1zrca2, d1zrcb2
      automated match to d1i5zb1
      protein/DNA complex; complexed with cmp
  16. Domain(s) for 1zrd:
    1. 1982276Domain d1zrda1: 1zrd A:138-207 [125535]
      Other proteins in same PDB: d1zrda2, d1zrdb2
      automated match to d1i5zb1
      protein/DNA complex; complexed with cmp
    2. 1982277Domain d1zrdb1: 1zrd B:138-207 [125537]
      Other proteins in same PDB: d1zrda2, d1zrdb2
      automated match to d1i5zb1
      protein/DNA complex; complexed with cmp
  17. Domain(s) for 1zre:
    1. 1982278Domain d1zrea1: 1zre A:138-207 [125539]
      Other proteins in same PDB: d1zrea2, d1zreb2
      automated match to d1i5zb1
      protein/DNA complex; complexed with cmp
    2. 1982279Domain d1zreb1: 1zre B:138-207 [125541]
      Other proteins in same PDB: d1zrea2, d1zreb2
      automated match to d1i5zb1
      protein/DNA complex; complexed with cmp
  18. Domain(s) for 1zrf:
    1. 1982250Domain d1zrfa1: 1zrf A:138-209 [125543]
      Other proteins in same PDB: d1zrfa2, d1zrfb2
      automated match to d1i5zb1
      protein/DNA complex; complexed with cmp, dio
    2. 1982251Domain d1zrfb1: 1zrf B:138-207 [125545]
      Other proteins in same PDB: d1zrfa2, d1zrfb2
      automated match to d1i5zb1
      protein/DNA complex; complexed with cmp, dio
  19. Domain(s) for 2cgp:
  20. Domain(s) for 2gzw:
    1. 1982258Domain d2gzwa1: 2gzw A:138-206 [135917]
      Other proteins in same PDB: d2gzwa2, d2gzwb2, d2gzwc2, d2gzwd2
      automated match to d1i5za1
      complexed with cmp
    2. 1982259Domain d2gzwb1: 2gzw B:138-203 [135919]
      Other proteins in same PDB: d2gzwa2, d2gzwb2, d2gzwc2, d2gzwd2
      automated match to d1i5za1
      complexed with cmp
    3. 1982260Domain d2gzwc1: 2gzw C:138-206 [135921]
      Other proteins in same PDB: d2gzwa2, d2gzwb2, d2gzwc2, d2gzwd2
      automated match to d1i5za1
      complexed with cmp
    4. 1982261Domain d2gzwd1: 2gzw D:138-208 [135923]
      Other proteins in same PDB: d2gzwa2, d2gzwb2, d2gzwc2, d2gzwd2
      automated match to d1i5zb1
      complexed with cmp
  21. Domain(s) for 3n4m:
  22. Domain(s) for 3qop:
    1. 1982244Domain d3qopa2: 3qop A:138-207 [215333]
      Other proteins in same PDB: d3qopa1, d3qopb1
      automated match to d1i5za1
      complexed with cmp, gol
    2. 1982245Domain d3qopb2: 3qop B:138-207 [215335]
      Other proteins in same PDB: d3qopa1, d3qopb1
      automated match to d1i5za1
      complexed with cmp, gol
  23. Domain(s) for 3ryp:
    1. 1982242Domain d3rypa2: 3ryp A:138-207 [216120]
      Other proteins in same PDB: d3rypa1, d3rypb1
      automated match to d1g6nb1
      complexed with cmp, gol
    2. 1982243Domain d3rypb2: 3ryp B:138-208 [216122]
      Other proteins in same PDB: d3rypa1, d3rypb1
      automated match to d1g6nb1
      complexed with cmp, gol
  24. Domain(s) for 3ryr:
    1. 1982267Domain d3ryra2: 3ryr A:138-207 [216124]
      Other proteins in same PDB: d3ryra1, d3ryrb1
      automated match to d1g6nb1
      complexed with cmp
    2. 1982268Domain d3ryrb2: 3ryr B:138-208 [216126]
      Other proteins in same PDB: d3ryra1, d3ryrb1
      automated match to d1g6nb1
      complexed with cmp
  25. Domain(s) for 4ft8:
    1. 1982254Domain d4ft8a2: 4ft8 A:138-207 [229819]
      Other proteins in same PDB: d4ft8a1, d4ft8b1
      automated match to d1i5zb1
      complexed with cmp, co, so4
    2. 1982255Domain d4ft8b2: 4ft8 B:138-206 [229818]
      Other proteins in same PDB: d4ft8a1, d4ft8b1
      automated match to d1i5za1
      complexed with cmp, co, so4
  26. Domain(s) for 4n9h:
    1. 1982269Domain d4n9ha2: 4n9h A:138-209 [257975]
      Other proteins in same PDB: d4n9ha1, d4n9hb1
      automated match to d1g6nb1
    2. 1982270Domain d4n9hb2: 4n9h B:138-209 [257973]
      Other proteins in same PDB: d4n9ha1, d4n9hb1
      automated match to d1g6nb1
  27. Domain(s) for 4n9i:
    1. 1982262Domain d4n9ia2: 4n9i A:138-209 [257979]
      Other proteins in same PDB: d4n9ia1, d4n9ib1, d4n9ic1, d4n9id1
      automated match to d1g6nb1
      protein/DNA complex; complexed with pcg
    2. 1982263Domain d4n9ib2: 4n9i B:138-209 [257977]
      Other proteins in same PDB: d4n9ia1, d4n9ib1, d4n9ic1, d4n9id1
      automated match to d1g6nb1
      protein/DNA complex; complexed with pcg
    3. 1982264Domain d4n9ic2: 4n9i C:138-209 [257981]
      Other proteins in same PDB: d4n9ia1, d4n9ib1, d4n9ic1, d4n9id1
      automated match to d1g6nb1
      protein/DNA complex; complexed with pcg
    4. 1982265Domain d4n9id2: 4n9i D:138-209 [257983]
      Other proteins in same PDB: d4n9ia1, d4n9ib1, d4n9ic1, d4n9id1
      automated match to d1g6nb1
      protein/DNA complex; complexed with pcg

More info for Species Escherichia coli [TaxId:562] from a.4.5.4 Catabolite gene activator protein (CAP), C-terminal domain

Timeline for Species Escherichia coli [TaxId:562] from a.4.5.4 Catabolite gene activator protein (CAP), C-terminal domain: