SCOPe 2.05: Protein: Arginine repressor (ArgR), N-terminal DNA-binding domain

Lineage for Protein: Arginine repressor (ArgR), N-terminal DNA-binding domain

Root: SCOPe 2.05
Class a: All alpha proteins [46456] (286 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families)
contains a small beta-sheet (wing)
Family a.4.5.3: Arginine repressor (ArgR), N-terminal DNA-binding domain [46792] (1 protein)
automatically mapped to Pfam PF01316
Protein Arginine repressor (ArgR), N-terminal DNA-binding domain [46793] (3 species)

Species:

Bacillus stearothermophilus [TaxId:1422] [46795] (1 PDB entry)
- Domains for 1b4a:
  1. Domain d1b4aa1: 1b4a A:4-78 [16088]
    Other proteins in same PDB: d1b4aa2, d1b4ab2, d1b4ac2, d1b4ad2, d1b4ae2, d1b4af2
  2. Domain d1b4ab1: 1b4a B:4-78 [16089]
    Other proteins in same PDB: d1b4aa2, d1b4ab2, d1b4ac2, d1b4ad2, d1b4ae2, d1b4af2
  3. Domain d1b4ac1: 1b4a C:4-78 [16090]
    Other proteins in same PDB: d1b4aa2, d1b4ab2, d1b4ac2, d1b4ad2, d1b4ae2, d1b4af2
  4. Domain d1b4ad1: 1b4a D:4-78 [16091]
    Other proteins in same PDB: d1b4aa2, d1b4ab2, d1b4ac2, d1b4ad2, d1b4ae2, d1b4af2
  5. Domain d1b4ae1: 1b4a E:4-78 [16092]
    Other proteins in same PDB: d1b4aa2, d1b4ab2, d1b4ac2, d1b4ad2, d1b4ae2, d1b4af2
  6. Domain d1b4af1: 1b4a F:4-78 [16093]
    Other proteins in same PDB: d1b4aa2, d1b4ab2, d1b4ac2, d1b4ad2, d1b4ae2, d1b4af2
Bacillus subtilis [TaxId:1423] [68966] (3 PDB entries)
1. Domains for 1f9n:
  1. Domain d1f9na1: 1f9n A:3-78 [64990]
    Other proteins in same PDB: d1f9na2, d1f9nb2, d1f9nc2, d1f9nd2, d1f9ne2, d1f9nf2
  2. Domain d1f9nb1: 1f9n B:1-78 [64992]
    Other proteins in same PDB: d1f9na2, d1f9nb2, d1f9nc2, d1f9nd2, d1f9ne2, d1f9nf2
  3. Domain d1f9nc1: 1f9n C:2-78 [64994]
    Other proteins in same PDB: d1f9na2, d1f9nb2, d1f9nc2, d1f9nd2, d1f9ne2, d1f9nf2
  4. Domain d1f9nd1: 1f9n D:4-78 [64996]
    Other proteins in same PDB: d1f9na2, d1f9nb2, d1f9nc2, d1f9nd2, d1f9ne2, d1f9nf2
  5. Domain d1f9ne1: 1f9n E:2-78 [64998]
    Other proteins in same PDB: d1f9na2, d1f9nb2, d1f9nc2, d1f9nd2, d1f9ne2, d1f9nf2
  6. Domain d1f9nf1: 1f9n F:1-78 [65000]
    Other proteins in same PDB: d1f9na2, d1f9nb2, d1f9nc2, d1f9nd2, d1f9ne2, d1f9nf2
2. Domain for 2p5k:
  - Domain d2p5ka_: 2p5k A: [149249]
    automated match to d2p5ka1
3. Domains for 2p5l:
  1. Domain d2p5lc1: 2p5l C:2-64 [149250]
    automatically matched to d1f9nb1
    protein/DNA complex; complexed with so4
  2. Domain d2p5ld1: 2p5l D:2-64 [149251]
    automatically matched to d1f9nb1
    protein/DNA complex; complexed with so4
  3. Domain d2p5lg1: 2p5l G:2-64 [149252]
    automatically matched to d1f9nb1
    protein/DNA complex; complexed with so4
  4. Domain d2p5lh1: 2p5l H:2-64 [149253]
    automatically matched to d1f9nb1
    protein/DNA complex; complexed with so4
Escherichia coli [TaxId:562] [46794] (1 PDB entry)
- Domain for 1aoy:
  - Domain d1aoya_: 1aoy A: [16087]

More info for Protein Arginine repressor (ArgR), N-terminal DNA-binding domain from a.4.5.3: Arginine repressor (ArgR), N-terminal DNA-binding domain

Timeline for Protein Arginine repressor (ArgR), N-terminal DNA-binding domain from a.4.5.3: Arginine repressor (ArgR), N-terminal DNA-binding domain:

Protein Arginine repressor (ArgR), N-terminal DNA-binding domain from a.4.5.3: Arginine repressor (ArgR), N-terminal DNA-binding domain first appeared (with stable ids) in SCOP 1.55
Protein Arginine repressor (ArgR), N-terminal DNA-binding domain from a.4.5.3: Arginine repressor (ArgR), N-terminal DNA-binding domain appears in SCOPe 2.04
Protein Arginine repressor (ArgR), N-terminal DNA-binding domain from a.4.5.3: Arginine repressor (ArgR), N-terminal DNA-binding domain appears in SCOPe 2.06
Protein Arginine repressor (ArgR), N-terminal DNA-binding domain from a.4.5.3: Arginine repressor (ArgR), N-terminal DNA-binding domain appears in the current release, SCOPe 2.08