SCOPe 2.08: Family a.4.1.9: Tetracyclin repressor-like, N-terminal domain

Lineage for Family a.4.1.9: Tetracyclin repressor-like, N-terminal domain

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.1: Homeodomain-like [46689] (21 families)
   consists only of helices

5. Family a.4.1.9: Tetracyclin repressor-like, N-terminal domain [46764] (35 proteins)

Proteins:

1. A-factor receptor homolog CprB [109653] (1 species)
   gamma-butyrolactone receptor

   • Species Streptomyces coelicolor [TaxId:1902] [109654] (2 PDB entries)
     Uniprot O66122

2. Ethr repressor [109651] (2 species)

   1. Species Mycobacterium tuberculosis [TaxId:1773] [109652] (34 PDB entries)
      Uniprot P96222 22-215

   2. Species Mycobacterium tuberculosis [TaxId:419947] [332339] (4 PDB entries)

3. Hemolysin II regulatory protein, HlyIIR [140197] (1 species)

   • Species Bacillus cereus [TaxId:1396] [140198] (1 PDB entry)
     Uniprot Q7X506 4-76

4. Hypothetical transcriptional regulator YcdC [88973] (1 species)

   • Species Escherichia coli [TaxId:562] [88974] (4 PDB entries)

5. Hypothetical transcriptional regulator YfiR [101005] (1 species)

   • Species Bacillus subtilis [TaxId:1423] [101006] (1 PDB entry)

6. Hypothetical transcriptional regulator YsiA [101003] (1 species)

   • Species Bacillus subtilis [TaxId:1423] [101004] (1 PDB entry)

7. Multidrug binding protein QacR [68964] (1 species)

   • Species Staphylococcus aureus [TaxId:1280] [68965] (24 PDB entries)
     Uniprot P23217

8. Probable transcriptional regulator PA1836 [140201] (1 species)

   • Species Pseudomonas aeruginosa [TaxId:287] [140202] (1 PDB entry)
     Uniprot Q9I2Q9 6-75

9. Probable transcriptional regulator PA3133 [140187] (1 species)

   • Species Pseudomonas aeruginosa [TaxId:287] [140188] (1 PDB entry)
     Uniprot Q9HZ91 1-76

10. Probable transcriptional regulator RHA1_ro04631 [140193] (1 species)

    • Species Rhodococcus sp. RHA1 [TaxId:101510] [140194] (1 PDB entry)
      Uniprot Q0S7R9 4-80

11. Putative regulator SCO4008 [140203] (1 species)

    • Species Streptomyces coelicolor [TaxId:1902] [140204] (1 PDB entry)
      Uniprot Q9ADP7 7-74

12. Putative regulatory protein Sco4313 [158254] (1 species)

    • Species Streptomyces coelicolor [TaxId:1902] [158255] (1 PDB entry)
      Uniprot Q9KXS8 8-86

13. Putative transcriptional regulator [140177] (1 species)

    • Species Rhodococcus sp. RHA1 [TaxId:101510] [140178] (1 PDB entry)

14. Putative transcriptional regulator Atu0279 [140211] (1 species)

    • Species Agrobacterium tumefaciens [TaxId:358] [140212] (1 PDB entry)
      Uniprot Q8UIL4 3-76

15. Putative transcriptional regulator Rha04620 [140195] (1 species)

    • Species Rhodococcus sp. RHA1 [TaxId:101510] [140196] (1 PDB entry)

16. Putative transcriptional regulator RHA1_ro03468 [158252] (1 species)

    • Species Rhodococcus sp. RHA1 [TaxId:101510] [158253] (1 PDB entry)
      Uniprot Q0SB15 18-87

17. Putative transcriptional regulator RHA1_ro09068 [140185] (1 species)

    • Species Rhodococcus sp. [TaxId:1831] [140186] (1 PDB entry)
      Uniprot Q0RX74 10-78

18. Putative transcriptional regulator SCO0857 [140207] (1 species)

    • Species Streptomyces coelicolor [TaxId:1902] [140208] (1 PDB entry)
      Uniprot Q9RCV4 35-99

19. Putative transcriptional regulator SCO4850 [158258] (1 species)

    • Species Streptomyces coelicolor [TaxId:1902] [158259] (1 PDB entry)
      Uniprot Q9KZ96 15-89

20. Putative transcriptional regulator SCO4940 [158250] (1 species)

    • Species Streptomyces coelicolor [TaxId:1902] [158251] (1 PDB entry)
      Uniprot Q8CJS4 8-82

21. Putative transcriptional regulator SCO5951 [140179] (1 species)

    • Species Streptomyces coelicolor [TaxId:1902] [140180] (1 PDB entry)
      Uniprot O54180 13-80

22. Putative transcriptional regulator SCO7704 [140199] (1 species)

    • Species Streptomyces coelicolor [TaxId:1902] [140200] (1 PDB entry)
      Uniprot Q93JG8 16-83

23. Putative transcriptional regulator YxaF [109657] (1 species)

    • Species Bacillus subtilis [TaxId:1423] [109658] (1 PDB entry)
      Uniprot P42105

24. Putative transcriptional repressor YbiH [109655] (1 species)

    • Species Salmonella typhimurium [TaxId:90371] [109656] (1 PDB entry)
      Uniprot Q8ZQN9

25. Tetracyclin repressor (Tet-repressor, TetR) [46765] (1 species)

    • Species Escherichia coli [TaxId:562] [46766] (36 PDB entries)

26. Transcriptional activator DhaS [158248] (1 species)

    • Species Lactococcus lactis [TaxId:1358] [158249] (1 PDB entry)
      Uniprot Q9CIV9 8-78

27. Transcriptional regulator BC3163 [140175] (1 species)

    • Species Bacillus cereus [TaxId:1396] [140176] (1 PDB entry)
      Uniprot Q81BJ4 9-77

28. Transcriptional regulator BC5000 [140191] (1 species)

    • Species Bacillus cereus [TaxId:1396] [140192] (1 PDB entry)
      Uniprot Q815X4 6-77

29. Transcriptional regulator Cgl1640/Cg1846 [158256] (1 species)

    • Species Corynebacterium glutamicum [TaxId:1718] [158257] (1 PDB entry)
      Uniprot Q8NQ14 1-78

30. Transcriptional regulator Cgl2612 [140181] (1 species)

    • Species Corynebacterium glutamicum [TaxId:1718] [140182] (5 PDB entries)
      Uniprot Q8NMG3 1-174

31. Transcriptional regulator EF0787 [140183] (1 species)

    • Species Enterococcus faecalis [TaxId:1351] [140184] (1 PDB entry)
      Uniprot Q837P6 4-71

32. Transcriptional regulator PsrA [140205] (1 species)

    • Species Pseudomonas aeruginosa [TaxId:287] [140206] (1 PDB entry)
      Uniprot Q9HZJ9 2-80

33. Transcriptional regulator RHA1_ro04179 [140189] (1 species)

    • Species Rhodococcus sp. [TaxId:1831] [140190] (1 PDB entry)
      Uniprot Q0S914 9-77

34. Transcriptional regulator TM1030 [140209] (1 species)

    • Species Thermotoga maritima [TaxId:2336] [140210] (8 PDB entries)
      Uniprot Q9X0C0 1-75! Uniprot Q9X0C0 2-75

35. automated matches [230914] (1 species)
    not a true protein

    • Species Bacillus cereus [TaxId:1396] [230915] (2 PDB entries)

More info for Family a.4.1.9: Tetracyclin repressor-like, N-terminal domain

Timeline for Family a.4.1.9: Tetracyclin repressor-like, N-terminal domain:

• Family a.4.1.9: Tetracyclin repressor-like, N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Family a.4.1.9: Tetracyclin repressor (Tet-repressor, TetR), N-terminal domain
  
• Family a.4.1.9: Tetracyclin repressor-like, N-terminal domain appears in SCOPe 2.07