Lineage for Protein: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1980368Fold a.3: Cytochrome c [46625] (1 superfamily)
    core: 3 helices; folded leaf, opened
  4. 1980369Superfamily a.3.1: Cytochrome c [46626] (9 families) (S)
    covalently-bound heme completes the core
  5. 1980816Family a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase [46671] (1 protein)
  6. 1980817Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase [46672] (3 species)
    the C-terminal domain is a 8-bladed beta-propeller

Species:

  1. 1980818Paracoccus denitrificans [TaxId:266] [46675] (2 PDB entries)
    1. Domains for 1e2r:
      1. 1980821Domain d1e2ra1: 1e2r A:36-135 [15953]
        Other proteins in same PDB: d1e2ra2, d1e2rb2
        complexed with cyn, dhe, gol, hec
      2. 1980822Domain d1e2rb1: 1e2r B:25-135 [15954]
        Other proteins in same PDB: d1e2ra2, d1e2rb2
        complexed with cyn, dhe, gol, hec
    2. Domains for 1qks:
      1. 1980819Domain d1qksa1: 1qks A:9-135 [15951]
        Other proteins in same PDB: d1qksa2, d1qksb2
        complexed with dhe, gol, hec, so4
      2. 1980820Domain d1qksb1: 1qks B:9-135 [15952]
        Other proteins in same PDB: d1qksa2, d1qksb2
        complexed with dhe, gol, hec, so4
  2. 1980823Paracoccus pantotrophus [TaxId:82367] [46673] (11 PDB entries)
    formerly Thiosphaera pantotropha
    1. Domains for 1aof:
      1. 1980836Domain d1aofa1: 1aof A:36-133 [15937]
        Other proteins in same PDB: d1aofa2, d1aofb2
        complexed with dhe, hem, so2
      2. 1980837Domain d1aofb1: 1aof B:26-133 [15938]
        Other proteins in same PDB: d1aofa2, d1aofb2
        complexed with dhe, hem, so2
    2. Domain for 1aom:
    3. Domains for 1aoq:
      1. 1980833Domain d1aoqa1: 1aoq A:17-133 [15934]
        Other proteins in same PDB: d1aoqa2, d1aoqb2
        complexed with 2no, dhe, hem, no
      2. 1980834Domain d1aoqb1: 1aoq B:9-133 [15935]
        Other proteins in same PDB: d1aoqa2, d1aoqb2
        complexed with 2no, dhe, hem, no
    4. Domain for 1dy7:
    5. Domains for 1gq1:
      1. 1980824Domain d1gq1a1: 1gq1 A:9-133 [76264]
        Other proteins in same PDB: d1gq1a2, d1gq1b2
        complexed with dhe, gol, hec, so4; mutant
      2. 1980825Domain d1gq1b1: 1gq1 B:9-133 [76266]
        Other proteins in same PDB: d1gq1a2, d1gq1b2
        complexed with dhe, gol, hec, so4; mutant
    6. Domains for 1h9x:
      1. 1980838Domain d1h9xa1: 1h9x A:42-133 [60855]
        Other proteins in same PDB: d1h9xa2, d1h9xb2
        complexed with dhe, hec, nhe, so4
      2. 1980839Domain d1h9xb1: 1h9x B:39-133 [60857]
        Other proteins in same PDB: d1h9xa2, d1h9xb2
        complexed with dhe, hec, nhe, so4
    7. Domains for 1h9y:
      1. 1980842Domain d1h9ya1: 1h9y A:48-133 [60859]
        Other proteins in same PDB: d1h9ya2, d1h9yb2
        complexed with cyn, dhe, hec, so4
      2. 1980843Domain d1h9yb1: 1h9y B:49-133 [60861]
        Other proteins in same PDB: d1h9ya2, d1h9yb2
        complexed with cyn, dhe, hec, so4
    8. Domains for 1hcm:
      1. 1980840Domain d1hcma1: 1hcm A:42-133 [60958]
        Other proteins in same PDB: d1hcma2, d1hcmb2
        complexed with dhe, hec, so4
      2. 1980841Domain d1hcmb1: 1hcm B:39-133 [60960]
        Other proteins in same PDB: d1hcma2, d1hcmb2
        complexed with dhe, hec, so4
    9. Domains for 1hj3:
      1. 1980829Domain d1hj3a1: 1hj3 A:17-133 [15930]
        Other proteins in same PDB: d1hj3a2, d1hj3b2
        complexed with dhe, gol, hec, oxy, so4
      2. 1980830Domain d1hj3b1: 1hj3 B:26-133 [15931]
        Other proteins in same PDB: d1hj3a2, d1hj3b2
        complexed with dhe, gol, hec, oxy, so4
    10. Domains for 1hj4:
      1. 1980831Domain d1hj4a1: 1hj4 A:17-133 [15932]
        Other proteins in same PDB: d1hj4a2, d1hj4b2
        complexed with dhe, gol, hec, so4
      2. 1980832Domain d1hj4b1: 1hj4 B:26-133 [15933]
        Other proteins in same PDB: d1hj4a2, d1hj4b2
        complexed with dhe, gol, hec, so4
    11. Domains for 1hj5:
      1. 1980826Domain d1hj5a1: 1hj5 A:9-133 [15927]
        Other proteins in same PDB: d1hj5a2, d1hj5b2
        complexed with dhe, gol, hec, so4
      2. 1980827Domain d1hj5b1: 1hj5 B:9-133 [15928]
        Other proteins in same PDB: d1hj5a2, d1hj5b2
        complexed with dhe, gol, hec, so4
  3. 1980844Pseudomonas aeruginosa [TaxId:287] [46674] (9 PDB entries)
    1. Domains for 1bl9:
      1. 1980858Domain d1bl9a1: 1bl9 A:7-117 [15947]
        Other proteins in same PDB: d1bl9a2, d1bl9b2
        complexed with dhe, hec, oh
      2. 1980859Domain d1bl9b1: 1bl9 B:7-117 [15948]
        Other proteins in same PDB: d1bl9a2, d1bl9b2
        complexed with dhe, hec, oh
    2. Domains for 1gjq:
      1. 1980847Domain d1gjqa1: 1gjq A:3-117 [70193]
        Other proteins in same PDB: d1gjqa2, d1gjqb2
        complexed with cyn, dhe, hec
      2. 1980848Domain d1gjqb1: 1gjq B:5-117 [70195]
        Other proteins in same PDB: d1gjqa2, d1gjqb2
        complexed with cyn, dhe, hec
    3. Domain for 1hzu:
    4. Domain for 1hzv:
    5. Domains for 1n15:
      1. 1980852Domain d1n15a1: 1n15 A:6-117 [15943]
        Other proteins in same PDB: d1n15a2, d1n15b2
        complexed with dhe, hec
      2. 1980853Domain d1n15b1: 1n15 B:5-117 [15944]
        Other proteins in same PDB: d1n15a2, d1n15b2
        complexed with dhe, hec
    6. Domains for 1n50:
      1. 1980856Domain d1n50a1: 1n50 A:6-117 [15949]
        Other proteins in same PDB: d1n50a2, d1n50b2
        complexed with dhe, hec
      2. 1980857Domain d1n50b1: 1n50 B:5-117 [15950]
        Other proteins in same PDB: d1n50a2, d1n50b2
        complexed with dhe, hec
    7. Domains for 1n90:
      1. 1980854Domain d1n90a1: 1n90 A:6-117 [15945]
        Other proteins in same PDB: d1n90a2, d1n90b2
        complexed with dhe, hec
      2. 1980855Domain d1n90b1: 1n90 B:5-117 [15946]
        Other proteins in same PDB: d1n90a2, d1n90b2
        complexed with dhe, hec
    8. Domains for 1nir:
      1. 1980845Domain d1nira1: 1nir A:6-117 [15939]
        Other proteins in same PDB: d1nira2, d1nirb2
        complexed with cl, dhe, hec, oh, po4
      2. 1980846Domain d1nirb1: 1nir B:5-117 [15940]
        Other proteins in same PDB: d1nira2, d1nirb2
        complexed with cl, dhe, hec, oh, po4
    9. Domains for 1nno:
      1. 1980850Domain d1nnoa1: 1nno A:5-117 [15941]
        Other proteins in same PDB: d1nnoa2, d1nnob2
        complexed with dhe, hec, no
      2. 1980851Domain d1nnob1: 1nno B:5-117 [15942]
        Other proteins in same PDB: d1nnoa2, d1nnob2
        complexed with dhe, hec, no

More info for Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase

Timeline for Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase:

  • Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase first appeared (with stable ids) in SCOP 1.55
  • Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase appears in SCOPe 2.05