Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2690796Fold a.3: Cytochrome c [46625] (1 superfamily)
    core: 3 helices; folded leaf, opened
  4. 2690797Superfamily a.3.1: Cytochrome c [46626] (9 families) (S)
    covalently-bound heme completes the core
  5. 2690798Family a.3.1.1: monodomain cytochrome c [46627] (16 proteins)
  6. 2691036Protein Mitochondrial cytochrome c [46642] (7 species)
  7. 2691040Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [46643] (92 PDB entries)
    Uniprot P00044

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]:

  1. Domain(s) for 1chh:
  2. Domain(s) for 1chi:
  3. Domain(s) for 1chj:
  4. Domain(s) for 1cie:
  5. Domain(s) for 1cif:
  6. Domain(s) for 1cig:
  7. Domain(s) for 1cih:
  8. Domain(s) for 1crg:
  9. Domain(s) for 1crh:
  10. Domain(s) for 1cri:
  11. Domain(s) for 1crj:
  12. Domain(s) for 1csu:
  13. Domain(s) for 1csv:
  14. Domain(s) for 1csw:
  15. Domain(s) for 1csx:
  16. Domain(s) for 1cty:
  17. Domain(s) for 1ctz:
  18. Domain(s) for 1fhb:
  19. Domain(s) for 1irv:
  20. Domain(s) for 1irw:
  21. Domain(s) for 1kyo:
  22. Domain(s) for 1lms:
  23. Domain(s) for 1nmi:
  24. Domain(s) for 1rap:
  25. Domain(s) for 1raq:
  26. Domain(s) for 1s6v:
    1. 2691061Domain d1s6vb_: 1s6v B: [98610]
      Other proteins in same PDB: d1s6va_, d1s6vc_
      complexed with hec, iod
    2. 2691062Domain d1s6vd_: 1s6v D: [98612]
      Other proteins in same PDB: d1s6va_, d1s6vc_
      complexed with hec, iod
  27. Domain(s) for 1u74:
    1. 2691122Domain d1u74b_: 1u74 B: [107705]
      Other proteins in same PDB: d1u74a_, d1u74c1, d1u74c2
      complexed with hem, po4, znh
    2. 2691123Domain d1u74d_: 1u74 D: [107707]
      Other proteins in same PDB: d1u74a_, d1u74c1, d1u74c2
      complexed with hem, po4, znh
  28. Domain(s) for 1ycc:
  29. Domain(s) for 1yea:
  30. Domain(s) for 1yeb:
  31. Domain(s) for 1yfc:
  32. Domain(s) for 1yic:
  33. Domain(s) for 1ytc:
  34. Domain(s) for 2b0z:
  35. Domain(s) for 2b10:
    1. 2691154Domain d2b10b1: 2b10 B:-4-103 [144943]
      Other proteins in same PDB: d2b10a_, d2b10c_
      complexed with hem, znh
    2. 2691155Domain d2b10d_: 2b10 D: [144944]
      Other proteins in same PDB: d2b10a_, d2b10c_
      automated match to d2b10b1
      complexed with hem, znh
  36. Domain(s) for 2b11:
    1. 2691111Domain d2b11b1: 2b11 B:296-403 [144945]
      Other proteins in same PDB: d2b11a_, d2b11c_
      complexed with hec, znh
    2. 2691112Domain d2b11d_: 2b11 D: [144946]
      Other proteins in same PDB: d2b11a_, d2b11c_
      automated match to d2b11b1
      complexed with hec, znh
  37. Domain(s) for 2b12:
  38. Domain(s) for 2bcn:
  39. Domain(s) for 2gb8:
  40. Domain(s) for 2hv4:
  41. Domain(s) for 2jti:
  42. Domain(s) for 2lir:
  43. Domain(s) for 2lit:
  44. Domain(s) for 2mhm:
  45. Domain(s) for 2n18:
    1. 2691163Domain d2n18b1: 2n18 B:-4-103 [272659]
      Other proteins in same PDB: d2n18a_, d2n18b2
      automated match to d1s6vb_
      complexed with hec, hem
    2. 2691164Domain d2n18c_: 2n18 C: [272660]
      Other proteins in same PDB: d2n18a_, d2n18b2
      automated match to d1ycca_
      complexed with hec, hem
  46. Domain(s) for 2orl:
  47. Domain(s) for 2pcc:
    1. 2691098Domain d2pccb_: 2pcc B: [15860]
      Other proteins in same PDB: d2pcca_, d2pccc_
      complexed with hem, so4
    2. 2691099Domain d2pccd_: 2pcc D: [15861]
      Other proteins in same PDB: d2pcca_, d2pccc_
      complexed with hem, so4
  48. Domain(s) for 2ycc:
  49. Domain(s) for 3cx5:
  50. Domain(s) for 3cxh:
  51. Domain(s) for 3tyi:
    1. 2691050Domain d3tyia_: 3tyi A: [192162]
      automated match to d2ycca_
      complexed with hem, t3y
    2. 2691051Domain d3tyib_: 3tyi B: [192163]
      automated match to d2ycca_
      complexed with hem, t3y
  52. Domain(s) for 4mu8:
    1. 2691046Domain d4mu8a_: 4mu8 A: [257106]
      automated match to d2bcnb_
      complexed with gol, hec, so4, tbu
    2. 2691047Domain d4mu8b_: 4mu8 B: [257108]
      automated match to d2bcnb_
      complexed with gol, hec, so4, tbu
  53. Domain(s) for 4n0k:
    1. 2691041Domain d4n0ka1: 4n0k A:-5-101 [259387]
      Other proteins in same PDB: d4n0ka2, d4n0kb2
      automated match to d3tyia_
      complexed with hec, t3y
    2. 2691042Domain d4n0kb1: 4n0k B:-5-101 [259388]
      Other proteins in same PDB: d4n0ka2, d4n0kb2
      automated match to d3tyia_
      complexed with hec, t3y
  54. Domain(s) for 4p4q:
    1. 2691108Domain d4p4qb_: 4p4q B: [270330]
      Other proteins in same PDB: d4p4qa_, d4p4qc_
      automated match to d1ycca_
      complexed with hem
    2. 2691109Domain d4p4qd_: 4p4q D: [270328]
      Other proteins in same PDB: d4p4qa_, d4p4qc_
      automated match to d1ycca_
      complexed with hem
  55. Domain(s) for 4q5p:
    1. 2691101Domain d4q5pa_: 4q5p A: [271685]
      automated match to d4mu8a_
      complexed with hem
    2. 2691102Domain d4q5pb_: 4q5p B: [271687]
      automated match to d4mu8a_
      complexed with hem
    3. 2691103Domain d4q5pc_: 4q5p C: [271686]
      automated match to d4mu8a_
      complexed with hem
  56. Domain(s) for 4qao:
    1. 2691116Domain d4qaoa1: 4qao A:-2-101 [275628]
      Other proteins in same PDB: d4qaoa2, d4qaob2, d4qaoc2
      automated match to d4mu8a_
      complexed with hem
    2. 2691117Domain d4qaob1: 4qao B:-2-101 [275627]
      Other proteins in same PDB: d4qaoa2, d4qaob2, d4qaoc2
      automated match to d4mu8a_
      complexed with hem
    3. 2691118Domain d4qaoc1: 4qao C:-2-101 [275626]
      Other proteins in same PDB: d4qaoa2, d4qaob2, d4qaoc2
      automated match to d4mu8a_
      complexed with hem
  57. Domain(s) for 4ye1:
    1. 2691048Domain d4ye1a_: 4ye1 A: [272786]
      automated match to d1ycca_
      complexed with gol, hem, t3y
    2. 2691049Domain d4ye1b_: 4ye1 B: [272787]
      automated match to d1ycca_
      complexed with gol, hem, t3y
  58. Domain(s) for 5cib:
    1. 2691149Domain d5cibb_: 5cib B: [320287]
      Other proteins in same PDB: d5ciba_, d5cibc_
      automated match to d1ycca_
      complexed with 51s, hec
    2. 2691150Domain d5cibd_: 5cib D: [320289]
      Other proteins in same PDB: d5ciba_, d5cibc_
      automated match to d1ycca_
      complexed with 51s, hec
  59. Domain(s) for 5cic:
    1. 2691073Domain d5cicb_: 5cic B: [320359]
      Other proteins in same PDB: d5cica_, d5cicc_
      automated match to d1ycca_
      complexed with 51r, hec
    2. 2691074Domain d5cicd_: 5cic D: [320271]
      Other proteins in same PDB: d5cica_, d5cicc_
      automated match to d1ycca_
      complexed with 51r, hec
  60. Domain(s) for 5cid:
    1. 2691133Domain d5cidb_: 5cid B: [320304]
      Other proteins in same PDB: d5cida_, d5cidc_
      automated match to d1ycca_
      complexed with 51v, hec
    2. 2691134Domain d5cidd_: 5cid D: [320264]
      Other proteins in same PDB: d5cida_, d5cidc_
      automated match to d1ycca_
      complexed with 51v, hec
  61. Domain(s) for 5cie:
    1. 2691125Domain d5cieb_: 5cie B: [320396]
      Other proteins in same PDB: d5ciea_, d5ciec_
      automated match to d1ycca_
      complexed with anl, hec
    2. 2691126Domain d5cied_: 5cie D: [320269]
      Other proteins in same PDB: d5ciea_, d5ciec_
      automated match to d1ycca_
      complexed with anl, hec
  62. Domain(s) for 5cif:
    1. 2691071Domain d5cifb_: 5cif B: [320281]
      Other proteins in same PDB: d5cifa_, d5cifc_
      automated match to d1ycca_
      complexed with hec
    2. 2691072Domain d5cifd_: 5cif D: [320306]
      Other proteins in same PDB: d5cifa_, d5cifc_
      automated match to d1ycca_
      complexed with hec
  63. Domain(s) for 5cig:
    1. 2691085Domain d5cigb_: 5cig B: [320285]
      Other proteins in same PDB: d5ciga_, d5cigc_
      automated match to d1ycca_
      complexed with hec
    2. 2691086Domain d5cigd_: 5cig D: [320261]
      Other proteins in same PDB: d5ciga_, d5cigc_
      automated match to d1ycca_
      complexed with hec
  64. Domain(s) for 5cih:
    1. 2691131Domain d5cihb_: 5cih B: [320441]
      Other proteins in same PDB: d5ciha_, d5cihc_
      automated match to d1ycca_
      complexed with hec
    2. 2691132Domain d5cihd_: 5cih D: [320329]
      Other proteins in same PDB: d5ciha_, d5cihc_
      automated match to d1ycca_
      complexed with hec
  65. Domain(s) for 5kke:
  66. Domain(s) for 5klu:
    1. 2691083Domain d5klua_: 5klu A: [332121]
      automated match to d4mu8a_
      complexed with 6uz, hec, so4
    2. 2691084Domain d5klub_: 5klu B: [331661]
      automated match to d4mu8a_
      complexed with 6uz, hec, so4
  67. Domain(s) for 5kpf:
    1. 2691065Domain d5kpfa1: 5kpf A:-4-103 [336582]
      Other proteins in same PDB: d5kpfa2, d5kpfb2
      automated match to d1s6vb_
      complexed with 6vj, hec, no3
    2. 2691066Domain d5kpfb1: 5kpf B:-4-103 [336613]
      Other proteins in same PDB: d5kpfa2, d5kpfb2
      automated match to d1s6vb_
      complexed with 6vj, hec, no3
  68. Domain(s) for 5lft:
  69. Domain(s) for 5lyc:
    1. 2691080Domain d5lyca_: 5lyc A: [334172]
      Other proteins in same PDB: d5lycb2
      automated match to d1s6vb_
      complexed with 7az, hec, so4
    2. 2691081Domain d5lycb1: 5lyc B:-4-103 [334139]
      Other proteins in same PDB: d5lycb2
      automated match to d1s6vb_
      complexed with 7az, hec, so4
  70. Domain(s) for 5ncv:
    1. 2691052Domain d5ncva_: 5ncv A: [346817]
      automated match to d5t8wa_
      complexed with 8te, cl, hec
    2. 2691053Domain d5ncvb_: 5ncv B: [346820]
      automated match to d5t8wa_
      complexed with 8te, cl, hec
  71. Domain(s) for 5t7h:
    1. 2691075Domain d5t7ha_: 5t7h A: [332108]
      automated match to d2bcnb_
      complexed with hec, so4, ze7
    2. 2691076Domain d5t7hb_: 5t7h B: [332161]
      automated match to d2bcnb_
      complexed with hec, so4, ze7
    3. 2691077Domain d5t7hc_: 5t7h C: [332164]
      automated match to d2bcnb_
      complexed with hec, so4, ze7
    4. 2691078Domain d5t7hd_: 5t7h D: [332130]
      automated match to d2bcnb_
      complexed with hec, so4, ze7
  72. Domain(s) for 5t8w:
    1. 2691059Domain d5t8wa_: 5t8w A: [341011]
      automated match to d1s6vb_
      complexed with cl, hec
    2. 2691060Domain d5t8wb_: 5t8w B: [341062]
      automated match to d1s6vb_
      complexed with cl, hec
  73. Domain(s) for 6egy:
    1. 2691147Domain d6egya_: 6egy A: [358471]
      automated match to d5t8wa_
      complexed with b4t, hec, so4
    2. 2691148Domain d6egyb_: 6egy B: [358472]
      automated match to d5t8wa_
      complexed with b4t, hec, so4
  74. Domain(s) for 6egz:
    1. 2691119Domain d6egza_: 6egz A: [358482]
      automated match to d5t8wa_
      complexed with b4x, hec, na, so4
    2. 2691120Domain d6egzb_: 6egz B: [358486]
      automated match to d5t8wa_
      complexed with b4x, hec, na, so4
  75. Domain(s) for 6gd6:
  76. Domain(s) for 6gd7:
  77. Domain(s) for 6gd8:
    1. 2691140Domain d6gd8a1: 6gd8 A:-4-103 [356825]
      Other proteins in same PDB: d6gd8a2, d6gd8b2, d6gd8c2, d6gd8d2
      automated match to d5t8wa_
      complexed with evb, hec
    2. 2691141Domain d6gd8b1: 6gd8 B:-4-103 [356793]
      Other proteins in same PDB: d6gd8a2, d6gd8b2, d6gd8c2, d6gd8d2
      automated match to d5t8wa_
      complexed with evb, hec
    3. 2691142Domain d6gd8c1: 6gd8 C:-4-103 [356788]
      Other proteins in same PDB: d6gd8a2, d6gd8b2, d6gd8c2, d6gd8d2
      automated match to d5t8wa_
      complexed with evb, hec
    4. 2691143Domain d6gd8d1: 6gd8 D:-4-103 [356796]
      Other proteins in same PDB: d6gd8a2, d6gd8b2, d6gd8c2, d6gd8d2
      automated match to d5t8wa_
      complexed with evb, hec
  78. Domain(s) for 6gd9:
  79. Domain(s) for 6gda:
  80. Domain(s) for 6p41:
    1. 2691156Domain d6p41b_: 6p41 B: [376118]
      Other proteins in same PDB: d6p41a_, d6p41c_
      automated match to d2bcnb_
      complexed with hem
    2. 2691157Domain d6p41d_: 6p41 D: [376146]
      Other proteins in same PDB: d6p41a_, d6p41c_
      automated match to d2bcnb_
      complexed with hem
  81. Domain(s) for 6p42:
    1. 2691158Domain d6p42b_: 6p42 B: [376157]
      Other proteins in same PDB: d6p42a_, d6p42c_
      automated match to d1ycca_
      complexed with hem
    2. 2691159Domain d6p42d_: 6p42 D: [376087]
      Other proteins in same PDB: d6p42a_, d6p42c_
      automated match to d1ycca_
      complexed with hem
  82. Domain(s) for 6p43:
  83. Domain(s) for 6rgi:
  84. Domain(s) for 6rsi:
  85. Domain(s) for 6rsj:
  86. Domain(s) for 6rsk:
    1. 2691128Domain d6rska1: 6rsk A:-4-103 [374550]
      Other proteins in same PDB: d6rska2, d6rskb2
      automated match to d5t8wa_
      complexed with evb, hec, so4, spm
    2. 2691129Domain d6rskb1: 6rsk B:-4-103 [374515]
      Other proteins in same PDB: d6rska2, d6rskb2
      automated match to d5t8wa_
      complexed with evb, hec, so4, spm
  87. Domain(s) for 6rsl:
    1. 2691106Domain d6rsla1: 6rsl A:-4-103 [374487]
      Other proteins in same PDB: d6rsla2, d6rslb2
      automated match to d5t8wa_
      complexed with evb, hec, so4, spm
    2. 2691107Domain d6rslb1: 6rsl B:-4-103 [374455]
      Other proteins in same PDB: d6rsla2, d6rslb2
      automated match to d5t8wa_
      complexed with evb, hec, so4, spm
  88. Domain(s) for 6s8y:
  89. Domain(s) for 6suy:
    1. 2691069Domain d6suya_: 6suy A: [379112]
      automated match to d5t8wa_
      complexed with hec, lvt, na, so4
    2. 2691070Domain d6suyb_: 6suy B: [379123]
      automated match to d5t8wa_
      complexed with hec, lvt, na, so4
  90. Domain(s) for 6y0j:
    1. 2691135Domain d6y0ja_: 6y0j A: [401220]
      automated match to d5t8wa_
      complexed with 7az, evb, hec
    2. 2691136Domain d6y0jb_: 6y0j B: [401322]
      automated match to d5t8wa_
      complexed with 7az, evb, hec
    3. 2691137Domain d6y0jc_: 6y0j C: [401246]
      automated match to d5t8wa_
      complexed with 7az, evb, hec
    4. 2691138Domain d6y0jd_: 6y0j D: [401324]
      automated match to d5t8wa_
      complexed with 7az, evb, hec
  91. Domain(s) for 7bbt:
    1. 3084384Domain d7bbtd_: 7bbt D: [420701]
      automated match to d5t8wa_
      complexed with 15p, hec, t8w
    2. 3084693Domain d7bbta_: 7bbt A: [421010]
      automated match to d5t8wa_
      complexed with 15p, hec, t8w
    3. 3084704Domain d7bbtc_: 7bbt C: [421021]
      automated match to d5t8wa_
      complexed with 15p, hec, t8w
    4. 3084733Domain d7bbtb_: 7bbt B: [421050]
      automated match to d5t8wa_
      complexed with 15p, hec, t8w
  92. Domain(s) for 7pr3:
    1. 3086068Domain d7pr3b_: 7pr3 B: [422385]
      automated match to d5t8wa_
      complexed with 80m, hec, po4, zn
    2. 3086080Domain d7pr3c_: 7pr3 C: [422397]
      automated match to d5t8wa_
      complexed with 80m, hec, po4, zn
    3. 3086137Domain d7pr3a_: 7pr3 A: [422454]
      automated match to d5t8wa_
      complexed with 80m, hec, po4, zn
    4. 3086194Domain d7pr3d_: 7pr3 D: [422511]
      automated match to d5t8wa_
      complexed with 80m, hec, po4, zn

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.3.1.1 Mitochondrial cytochrome c

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.3.1.1 Mitochondrial cytochrome c: