SCOPe 2.05: Family a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain

Lineage for Family a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.2: Long alpha-hairpin [46556] (20 superfamilies)
   2 helices; antiparallel hairpin, left-handed twist

4. Superfamily a.2.11: Fe,Mn superoxide dismutase (SOD), N-terminal domain [46609] (2 families)
   automatically mapped to Pfam PF00081

5. Family a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain [46610] (4 proteins)

Proteins:

1. Cambialistic superoxide dismutase [46622] (2 species)
   active with either Fe or Mn

   1. Species Porphyromonas gingivalis [TaxId:837] [46624] (3 PDB entries)
      Uniprot P19665

   2. Species Propionibacterium shermanii [TaxId:1752] [46623] (6 PDB entries)

2. Fe superoxide dismutase (FeSOD) [46611] (10 species)

   1. Species Aquifex pyrophilus [TaxId:2714] [46615] (1 PDB entry)

   2. Species Cowpea (Vigna unguiculata) [TaxId:3917] [116762] (1 PDB entry)
      Uniprot Q9M7R2 21-245

   3. Species Escherichia coli [TaxId:562] [46614] (5 PDB entries)

   4. Species Methanobacterium thermoautotrophicum [TaxId:145262] [74664] (1 PDB entry)

   5. Species Mycobacterium tuberculosis [TaxId:1773] [46612] (5 PDB entries)

   6. Species Pseudomonas ovalis [TaxId:303] [46613] (2 PDB entries)

   7. Species Pyrobaculum aerophilum [TaxId:13773] [100984] (2 PDB entries)

   8. Species Sulfolobus acidocaldarius [TaxId:2285] [46617] (1 PDB entry)

   9. Species Sulfolobus solfataricus [TaxId:2287] [46616] (2 PDB entries)
      Uniprot P80857

   10. Species Thermosynechococcus elongatus [TaxId:146786] [88971] (1 PDB entry)

3. Mn superoxide dismutase (MnSOD) [46618] (9 species)

   1. Species Anabaena sp. [TaxId:1167] [74666] (1 PDB entry)

   2. Species Aspergillus fumigatus [TaxId:5085] [68944] (1 PDB entry)

   3. Species Bacillus halodenitrificans [TaxId:1482] [74665] (1 PDB entry)

   4. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [225564] (1 PDB entry)

   5. Species Deinococcus radiodurans [TaxId:1299] [116763] (2 PDB entries)
      Uniprot Q9RUV2

   6. Species Escherichia coli K-12 [TaxId:83333] [224842] (1 PDB entry)

   7. Species Escherichia coli [TaxId:562] [46620] (12 PDB entries)

   8. Species Human (Homo sapiens) [TaxId:9606] [46619] (26 PDB entries)

   9. Species Thermus thermophilus [TaxId:274] [46621] (2 PDB entries)

4. automated matches [227044] (3 species)
   not a true protein

   1. Species Deinococcus radiodurans [TaxId:1299] [226010] (1 PDB entry)

   2. Species Escherichia coli [TaxId:562] [255056] (1 PDB entry)

   3. Species Human (Homo sapiens) [TaxId:9606] [255568] (1 PDB entry)

More info for Family a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain

Timeline for Family a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain:

• Family a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain first appeared (with stable ids) in SCOP 1.55
  
• Family a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain appears in SCOPe 2.04
  
• Family a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain appears in SCOPe 2.06
  
• Family a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain appears in the current release, SCOPe 2.08