Class a: All alpha proteins [46456] (284 folds) |
Fold a.1: Globin-like [46457] (2 superfamilies) core: 6 helices; folded leaf, partly opened |
Superfamily a.1.1: Globin-like [46458] (5 families) |
Family a.1.1.2: Globins [46463] (27 proteins) Heme-binding protein |
Ascaris hemoglobin, domain 1 [46520] (1 species) |
Species Pig roundworm (Ascaris suum) [TaxId:6253] [46521] (1 PDB entry) |
Bacterial dimeric hemoglobin [46526] (1 species) |
Species Vitreoscilla stercoraria [TaxId:61] [46527] (4 PDB entries) |
Chimeric hemoglobin beta-alpha [46516] (1 species) |
Species Synthetic, based on Homo sapiens sequence [46517] (1 PDB entry) |
Cytoglobin [109626] (1 species) |
Species Human (Homo sapiens) [TaxId:9606] [109627] (6 PDB entries) Uniprot Q8WWM9 18-171 |
Dehaloperoxidase [46530] (1 species) |
Species Amphitrite ornata [TaxId:129555] [46531] (20 PDB entries) |
Erythrocruorin [46479] (1 species) |
Species Midge (Chironomus thummi thummi), fraction III [TaxId:7154] [46480] (4 PDB entries) |
Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 [116758] (1 species) |
Species Common earthworm (Lumbricus terrestris) [TaxId:6398] [116759] (2 PDB entries) Uniprot O61233 19-158 |
Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B) [116754] (1 species) |
Species Common earthworm (Lumbricus terrestris) [TaxId:6398] [116755] (2 PDB entries) Uniprot P02218 |
Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) [116756] (1 species) |
Species Common earthworm (Lumbricus terrestris) [TaxId:6398] [116757] (2 PDB entries) Uniprot P11069 20-168 |
Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A) [116752] (1 species) |
Species Common earthworm (Lumbricus terrestris) [TaxId:6398] [116753] (2 PDB entries) Uniprot P13579 |
Flavohemoglobin, N-terminal domain [46528] (2 species) |
Species Alcaligenes eutrophus [TaxId:106590] [46529] (1 PDB entry) |
Species Escherichia coli [TaxId:562] [74663] (1 PDB entry) |
Glycera globin [46467] (1 species) |
Species Marine bloodworm (Glycera dibranchiata) [TaxId:6350] [46468] (8 PDB entries) |
Hagfish hemoglobin [68941] (1 species) |
Species Inshore hagfish (Eptatretus burgeri) [TaxId:7764] [68942] (2 PDB entries) |
Heme-based aerotactic transducer HemAT, sensor domain [100980] (1 species) |
Species Bacillus subtilis [TaxId:1423] [100981] (2 PDB entries) |
Hemoglobin [46522] (1 species) |
Species Innkeeper worm (Urechis caupo) [TaxId:6431] [46523] (1 PDB entry) |
Hemoglobin I [46464] (2 species) |
Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [46465] (37 PDB entries) |
Species Clam (Lucina pectinata) [TaxId:244486] [46466] (4 PDB entries) |
Hemoglobin, alpha-chain [46486] (22 species) |
Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100976] (3 PDB entries) Uniprot P83134 |
Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46497] (6 PDB entries) |
Species Bar-headed goose (Anser indicus) [TaxId:8846] [46493] (3 PDB entries) |
Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109623] (3 PDB entries) Uniprot Q8AYM0 |
Species Canis lupus [TaxId:9615] [189534] (1 PDB entry) |
Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46496] (2 PDB entries) |
Species Chicken (Gallus gallus) [TaxId:9031] [46492] (1 PDB entry) |
Species Cow (Bos taurus) [TaxId:9913] [46490] (11 PDB entries) |
Species Deer (Odocoileus virginianus) [TaxId:9874] [46489] (1 PDB entry) |
Species Donkey (Equus asinus) [TaxId:9793] [158217] (1 PDB entry) Uniprot P01959 1-141 beta-chain sequences of donkey and horse hemoglobins are identical |
Species Dusicyon thous [TaxId:9620] [186966] (1 PDB entry) |
Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46495] (10 PDB entries) |
Species Fish (Leiostomus xanthurus) [TaxId:59837] [46498] (1 PDB entry) |
Species Graylag goose (Anser anser) [TaxId:8843] [68938] (1 PDB entry) |
Species Horse (Equus caballus) [TaxId:9796] [46488] (15 PDB entries) |
Species Houndshark (Mustelus griseus) [TaxId:89020] [46499] (2 PDB entries) |
Species Human (Homo sapiens) [TaxId:9606] [46487] (201 PDB entries) Uniprot P69905 P01922 P01934 P01935 |
Species Human (Homo sapiens), zeta isoform [TaxId:9606] [68937] (2 PDB entries) |
Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63440] (1 PDB entry) |
Species Pig (Sus scrofa) [TaxId:9823] [46491] (3 PDB entries) |
Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46494] (2 PDB entries) |
Species Yellow perch (Perca flavescens) [TaxId:8167] [116749] (1 PDB entry) Uniprot P83270; 78% sequence identity |
Hemoglobin, beta-chain [46500] (25 species) |
Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100977] (3 PDB entries) Uniprot P83133 |
Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46513] (6 PDB entries) |
Species Bar-headed goose (Anser indicus) [TaxId:8846] [46509] (3 PDB entries) |
Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109624] (3 PDB entries) Uniprot Q8AYM1 |
Species Canis lupus familiaris [TaxId:9615] [158218] (1 PDB entry) |
Species Canis lupus [TaxId:9615] [189535] (1 PDB entry) |
Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46512] (2 PDB entries) |
Species Chicken (Gallus gallus) [TaxId:9031] [46508] (1 PDB entry) |
Species Cow (Bos taurus) [TaxId:9913] [46506] (11 PDB entries) |
Species Deer (Odocoileus virginianus) [TaxId:9874] [46505] (1 PDB entry) |
Species Donkey (Equus asinus) [TaxId:9793] [158216] (1 PDB entry) beta-chain sequences of donkey and horse hemoglobins are identical |
Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46511] (10 PDB entries) |
Species Fish (Leiostomus xanthurus) [TaxId:59837] [46514] (1 PDB entry) |
Species Graylag goose (Anser anser) [TaxId:8843] [68940] (1 PDB entry) |
Species Horse (Equus caballus) [TaxId:9796] [46504] (15 PDB entries) |
Species Houndshark (Mustelus griseus) [TaxId:89020] [46515] (2 PDB entries) |
Species Human (Homo sapiens) [TaxId:9606] [46501] (199 PDB entries) Uniprot P68871 |
Species Human (Homo sapiens), delta-chain [TaxId:9606] [116750] (2 PDB entries) Uniprot P02042 |
Species Human (Homo sapiens), embryonic gower II [TaxId:9606] [46503] (1 PDB entry) |
Species Human fetus (Homo sapiens), gamma-chain [TaxId:9606] [46502] (3 PDB entries) |
Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63441] (1 PDB entry) |
Species Mouse (Mus musculus) [TaxId:10090] [68939] (1 PDB entry) |
Species Pig (Sus scrofa) [TaxId:9823] [46507] (2 PDB entries) |
Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46510] (2 PDB entries) |
Species Yellow perch (Perca flavescens) [TaxId:8167] [116751] (4 PDB entries) Uniprot P83273; 86% sequence identity |
Hemoglobin, different isoforms [46524] (1 species) |
Species Caudina arenicola, also known as Molpadia arenicola [TaxId:7698] [46525] (2 PDB entries) |
Hypothetical protein PA3967 [109628] (1 species) |
Species Pseudomonas aeruginosa [TaxId:287] [109629] (1 PDB entry) Uniprot Q9HX49 |
Lamprey globin [46518] (2 species) |
Species Lamprey (Lampetra fluviatilis) [TaxId:7748] [88966] (1 PDB entry) |
Species Sea lamprey (Petromyzon marinus) [TaxId:7757] [46519] (4 PDB entries) |
Leghemoglobin [46481] (2 species) |
Species Soybean (Glycine max), isoform A [TaxId:3847] [46483] (2 PDB entries) |
Species Yellow lupine (Lupinus luteus) [TaxId:3873] [46482] (17 PDB entries) |
Myoglobin [46469] (9 species) |
Species Asian elephant (Elephas maximus) [TaxId:9783] [46476] (1 PDB entry) |
Species Common seal (Phoca vitulina) [TaxId:9720] [46472] (1 PDB entry) |
Species Horse (Equus caballus) [TaxId:9796] [46474] (61 PDB entries) |
Species Human (Homo sapiens) [TaxId:9606] [46475] (1 PDB entry) |
Species Loggerhead sea turtle (Caretta caretta) [TaxId:8467] [46477] (2 PDB entries) |
Species Pig (Sus scrofa) [TaxId:9823] [46473] (17 PDB entries) |
Species Slug sea hare (Aplysia limacina) [TaxId:6502] [46471] (7 PDB entries) |
Species Sperm whale (Physeter catodon) [TaxId:9755] [46470] (229 PDB entries) Uniprot P02185 |
Species Yellowfin tuna (Thunnus albacares) [TaxId:8236] [46478] (1 PDB entry) |
Neuroglobin [100978] (2 species) |
Species Human (Homo sapiens) [TaxId:9606] [100979] (1 PDB entry) |
Species Mouse (Mus musculus) [TaxId:10090] [109625] (5 PDB entries) Uniprot Q9ER97 |
Non-symbiotic plant hemoglobin [46484] (1 species) |
Species Rice (Oryza sativa) [TaxId:4530] [46485] (3 PDB entries) |
Trematode hemoglobin/myoglobin [63438] (1 species) |
Species Paramphistomum epiclitum [TaxId:54403] [63439] (2 PDB entries) |
automated matches [190359] (36 species) not a true protein |
Species Amphitrite ornata [TaxId:129555] [189339] (1 PDB entry) |
Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [187427] (31 PDB entries) |
Species Barley (Hordeum vulgare) [TaxId:4513] [187359] (1 PDB entry) |
Species Brycon cephalus [TaxId:126311] [188621] (1 PDB entry) |
Species Buffalo (Bubalus bubalis) [TaxId:89462] [188864] (1 PDB entry) |
Species Camel (Camelus dromedarius) [TaxId:9838] [189249] (1 PDB entry) |
Species Cat (Felis catus) [TaxId:9685] [188888] (4 PDB entries) |
Species Coturnix japonica [TaxId:93934] [189557] (1 PDB entry) |
Species Domestic pigeon (Columba livia) [TaxId:8932] [188616] (2 PDB entries) |
Species Duck (Anas platyrhynchos) [TaxId:8839] [189063] (1 PDB entry) |
Species Dusicyon thous [TaxId:9620] [187446] (1 PDB entry) |
Species Eleginops maclovinus [TaxId:56733] [193401] (1 PDB entry) |
Species Escherichia coli [TaxId:562] [196657] (1 PDB entry) |
Species Goat (Capra hircus) [TaxId:9925] [188635] (2 PDB entries) |
Species Guinea pig (Cavia porcellus) [TaxId:10141] [189281] (2 PDB entries) |
Species Human (Homo sapiens) [TaxId:9606] [188371] (3 PDB entries) |
Species Isurus oxyrinchus [TaxId:57983] [189618] (1 PDB entry) |
Species Lepus europaeus [TaxId:9983] [189630] (1 PDB entry) |
Species Maize (Zea mays) [TaxId:76912] [188014] (1 PDB entry) |
Species Mammuthus primigenius [TaxId:37349] [194337] (3 PDB entries) |
Species Mouse (Mus musculus) [TaxId:10090] [187190] (2 PDB entries) |
Species Norway rat (Rattus norvegicus) [TaxId:10116] [188924] (2 PDB entries) |
Species Parasponia andersonii [TaxId:3476] [193708] (1 PDB entry) |
Species Peromyscus maniculatus [TaxId:10042] [196779] (1 PDB entry) |
Species Podocnemis unifilis [TaxId:227871] [189922] (2 PDB entries) |
Species Pteropus giganteus [TaxId:143291] [188768] (1 PDB entry) |
Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [188592] (1 PDB entry) |
Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [188309] (2 PDB entries) |
Species Sheep (Ovis aries) [TaxId:9940] [188522] (1 PDB entry) |
Species Sperm whale (Physeter catodon) [TaxId:9755] [188226] (7 PDB entries) |
Species Struthio camelus [TaxId:8801] [188835] (1 PDB entry) |
Species Thunnus atlanticus [TaxId:48168] [187921] (3 PDB entries) |
Species Thunnus orientalis [TaxId:8238] [187933] (1 PDB entry) |
Species Trema tomentosa [TaxId:3480] [196352] (1 PDB entry) |
Species Turkey (Meleagris gallopavo) [TaxId:9103] [189160] (2 PDB entries) |
Species Yellow perch (Perca flavescens) [TaxId:8167] [188574] (3 PDB entries) |
Timeline for Family a.1.1.2: Globins: