Lineage for Family a.1.1.2: Globins

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1074917Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 1074918Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 1074991Family a.1.1.2: Globins [46463] (27 proteins)
    Heme-binding protein

Proteins:

  1. 1074992Ascaris hemoglobin, domain 1 [46520] (1 species)
  2. 1074995Bacterial dimeric hemoglobin [46526] (1 species)
  3. 1075005Chimeric hemoglobin beta-alpha [46516] (1 species)
  4. 1075011Cytoglobin [109626] (1 species)
  5. 1075024Dehaloperoxidase [46530] (1 species)
  6. 1075062Erythrocruorin [46479] (1 species)
  7. 1075068Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 [116758] (1 species)
  8. 1075076Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B) [116754] (1 species)
  9. 1075084Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) [116756] (1 species)
  10. 1075092Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A) [116752] (1 species)
  11. 1075100Flavohemoglobin, N-terminal domain [46528] (2 species)
    1. 1075101Species Alcaligenes eutrophus [TaxId:106590] [46529] (1 PDB entry)
    2. 1075104Species Escherichia coli [TaxId:562] [74663] (1 PDB entry)
  12. 1075106Glycera globin [46467] (1 species)
  13. 1075116Hagfish hemoglobin [68941] (1 species)
  14. 1075124Heme-based aerotactic transducer HemAT, sensor domain [100980] (1 species)
  15. 1075130Hemoglobin [46522] (1 species)
  16. 1075134Hemoglobin I [46464] (2 species)
    1. 1075135Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [46465] (37 PDB entries)
    2. 1075226Species Clam (Lucina pectinata) [TaxId:244486] [46466] (4 PDB entries)
  17. 1075231Hemoglobin, alpha-chain [46486] (22 species)
    1. 1075232Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100976] (3 PDB entries)
      Uniprot P83134
    2. 1075236Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46497] (6 PDB entries)
    3. 1075246Species Bar-headed goose (Anser indicus) [TaxId:8846] [46493] (3 PDB entries)
    4. 1075253Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109623] (3 PDB entries)
      Uniprot Q8AYM0
    5. 1075260Species Canis lupus [TaxId:9615] [189534] (1 PDB entry)
    6. 1075262Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46496] (2 PDB entries)
    7. 1075265Species Chicken (Gallus gallus) [TaxId:9031] [46492] (1 PDB entry)
    8. 1075268Species Cow (Bos taurus) [TaxId:9913] [46490] (11 PDB entries)
    9. 1075291Species Deer (Odocoileus virginianus) [TaxId:9874] [46489] (1 PDB entry)
    10. 1075294Species Donkey (Equus asinus) [TaxId:9793] [158217] (1 PDB entry)
      Uniprot P01959 1-141
      beta-chain sequences of donkey and horse hemoglobins are identical
    11. 1075296Species Dusicyon thous [TaxId:9620] [186966] (1 PDB entry)
    12. 1075300Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46495] (10 PDB entries)
    13. 1075316Species Fish (Leiostomus xanthurus) [TaxId:59837] [46498] (1 PDB entry)
    14. 1075318Species Graylag goose (Anser anser) [TaxId:8843] [68938] (1 PDB entry)
    15. 1075321Species Horse (Equus caballus) [TaxId:9796] [46488] (15 PDB entries)
    16. 1075342Species Houndshark (Mustelus griseus) [TaxId:89020] [46499] (2 PDB entries)
    17. 1075347Species Human (Homo sapiens) [TaxId:9606] [46487] (201 PDB entries)
      Uniprot P69905 P01922 P01934 P01935
    18. 1075742Species Human (Homo sapiens), zeta isoform [TaxId:9606] [68937] (2 PDB entries)
    19. 1075748Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63440] (1 PDB entry)
    20. 1075751Species Pig (Sus scrofa) [TaxId:9823] [46491] (3 PDB entries)
    21. 1075760Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46494] (2 PDB entries)
    22. 1075764Species Yellow perch (Perca flavescens) [TaxId:8167] [116749] (1 PDB entry)
      Uniprot P83270; 78% sequence identity
  18. 1075767Hemoglobin, beta-chain [46500] (25 species)
    1. 1075768Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100977] (3 PDB entries)
      Uniprot P83133
    2. 1075772Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46513] (6 PDB entries)
    3. 1075782Species Bar-headed goose (Anser indicus) [TaxId:8846] [46509] (3 PDB entries)
    4. 1075789Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109624] (3 PDB entries)
      Uniprot Q8AYM1
    5. 1075796Species Canis lupus familiaris [TaxId:9615] [158218] (1 PDB entry)
    6. 1075799Species Canis lupus [TaxId:9615] [189535] (1 PDB entry)
    7. 1075801Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46512] (2 PDB entries)
    8. 1075804Species Chicken (Gallus gallus) [TaxId:9031] [46508] (1 PDB entry)
    9. 1075807Species Cow (Bos taurus) [TaxId:9913] [46506] (11 PDB entries)
    10. 1075830Species Deer (Odocoileus virginianus) [TaxId:9874] [46505] (1 PDB entry)
    11. 1075833Species Donkey (Equus asinus) [TaxId:9793] [158216] (1 PDB entry)
      beta-chain sequences of donkey and horse hemoglobins are identical
    12. 1075835Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46511] (10 PDB entries)
    13. 1075852Species Fish (Leiostomus xanthurus) [TaxId:59837] [46514] (1 PDB entry)
    14. 1075854Species Graylag goose (Anser anser) [TaxId:8843] [68940] (1 PDB entry)
    15. 1075857Species Horse (Equus caballus) [TaxId:9796] [46504] (15 PDB entries)
    16. 1075878Species Houndshark (Mustelus griseus) [TaxId:89020] [46515] (2 PDB entries)
    17. 1075883Species Human (Homo sapiens) [TaxId:9606] [46501] (199 PDB entries)
      Uniprot P68871
    18. 1076277Species Human (Homo sapiens), delta-chain [TaxId:9606] [116750] (2 PDB entries)
      Uniprot P02042
    19. 1076282Species Human (Homo sapiens), embryonic gower II [TaxId:9606] [46503] (1 PDB entry)
    20. 1076285Species Human fetus (Homo sapiens), gamma-chain [TaxId:9606] [46502] (3 PDB entries)
    21. 1076292Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63441] (1 PDB entry)
    22. 1076295Species Mouse (Mus musculus) [TaxId:10090] [68939] (1 PDB entry)
    23. 1076298Species Pig (Sus scrofa) [TaxId:9823] [46507] (2 PDB entries)
    24. 1076303Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46510] (2 PDB entries)
    25. 1076307Species Yellow perch (Perca flavescens) [TaxId:8167] [116751] (4 PDB entries)
      Uniprot P83273; 86% sequence identity
  19. 1076316Hemoglobin, different isoforms [46524] (1 species)
  20. 1076320Hypothetical protein PA3967 [109628] (1 species)
  21. 1076323Lamprey globin [46518] (2 species)
    1. 1076324Species Lamprey (Lampetra fluviatilis) [TaxId:7748] [88966] (1 PDB entry)
    2. 1076337Species Sea lamprey (Petromyzon marinus) [TaxId:7757] [46519] (4 PDB entries)
  22. 1076363Leghemoglobin [46481] (2 species)
    1. 1076364Species Soybean (Glycine max), isoform A [TaxId:3847] [46483] (2 PDB entries)
    2. 1076369Species Yellow lupine (Lupinus luteus) [TaxId:3873] [46482] (17 PDB entries)
  23. 1076387Myoglobin [46469] (9 species)
    1. 1076388Species Asian elephant (Elephas maximus) [TaxId:9783] [46476] (1 PDB entry)
    2. 1076390Species Common seal (Phoca vitulina) [TaxId:9720] [46472] (1 PDB entry)
    3. 1076392Species Horse (Equus caballus) [TaxId:9796] [46474] (61 PDB entries)
    4. 1076456Species Human (Homo sapiens) [TaxId:9606] [46475] (1 PDB entry)
    5. 1076458Species Loggerhead sea turtle (Caretta caretta) [TaxId:8467] [46477] (2 PDB entries)
    6. 1076461Species Pig (Sus scrofa) [TaxId:9823] [46473] (17 PDB entries)
    7. 1076495Species Slug sea hare (Aplysia limacina) [TaxId:6502] [46471] (7 PDB entries)
    8. 1076503Species Sperm whale (Physeter catodon) [TaxId:9755] [46470] (229 PDB entries)
      Uniprot P02185
    9. 1076734Species Yellowfin tuna (Thunnus albacares) [TaxId:8236] [46478] (1 PDB entry)
  24. 1076736Neuroglobin [100978] (2 species)
    1. 1076737Species Human (Homo sapiens) [TaxId:9606] [100979] (1 PDB entry)
    2. 1076742Species Mouse (Mus musculus) [TaxId:10090] [109625] (5 PDB entries)
      Uniprot Q9ER97
  25. 1076748Non-symbiotic plant hemoglobin [46484] (1 species)
  26. 1076756Trematode hemoglobin/myoglobin [63438] (1 species)
  27. 1076761automated matches [190359] (36 species)
    not a true protein
    1. 1076762Species Amphitrite ornata [TaxId:129555] [189339] (1 PDB entry)
    2. 1076765Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [187427] (31 PDB entries)
    3. 1076831Species Barley (Hordeum vulgare) [TaxId:4513] [187359] (1 PDB entry)
    4. 1076840Species Brycon cephalus [TaxId:126311] [188621] (1 PDB entry)
    5. 1076845Species Buffalo (Bubalus bubalis) [TaxId:89462] [188864] (1 PDB entry)
    6. 1076850Species Camel (Camelus dromedarius) [TaxId:9838] [189249] (1 PDB entry)
    7. 1076855Species Cat (Felis catus) [TaxId:9685] [188888] (4 PDB entries)
    8. 1076880Species Coturnix japonica [TaxId:93934] [189557] (1 PDB entry)
    9. 1076885Species Domestic pigeon (Columba livia) [TaxId:8932] [188616] (2 PDB entries)
    10. 1076898Species Duck (Anas platyrhynchos) [TaxId:8839] [189063] (1 PDB entry)
    11. 1076901Species Dusicyon thous [TaxId:9620] [187446] (1 PDB entry)
    12. 1076903Species Eleginops maclovinus [TaxId:56733] [193401] (1 PDB entry)
    13. 1076907Species Escherichia coli [TaxId:562] [196657] (1 PDB entry)
    14. 1076909Species Goat (Capra hircus) [TaxId:9925] [188635] (2 PDB entries)
    15. 1076922Species Guinea pig (Cavia porcellus) [TaxId:10141] [189281] (2 PDB entries)
    16. 1076927Species Human (Homo sapiens) [TaxId:9606] [188371] (3 PDB entries)
    17. 1076935Species Isurus oxyrinchus [TaxId:57983] [189618] (1 PDB entry)
    18. 1076940Species Lepus europaeus [TaxId:9983] [189630] (1 PDB entry)
    19. 1076945Species Maize (Zea mays) [TaxId:76912] [188014] (1 PDB entry)
    20. 1076950Species Mammuthus primigenius [TaxId:37349] [194337] (3 PDB entries)
    21. 1076959Species Mouse (Mus musculus) [TaxId:10090] [187190] (2 PDB entries)
    22. 1076965Species Norway rat (Rattus norvegicus) [TaxId:10116] [188924] (2 PDB entries)
    23. 1076972Species Parasponia andersonii [TaxId:3476] [193708] (1 PDB entry)
    24. 1076974Species Peromyscus maniculatus [TaxId:10042] [196779] (1 PDB entry)
    25. 1076977Species Podocnemis unifilis [TaxId:227871] [189922] (2 PDB entries)
    26. 1076982Species Pteropus giganteus [TaxId:143291] [188768] (1 PDB entry)
    27. 1076985Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [188592] (1 PDB entry)
    28. 1076990Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [188309] (2 PDB entries)
    29. 1076999Species Sheep (Ovis aries) [TaxId:9940] [188522] (1 PDB entry)
    30. 1077004Species Sperm whale (Physeter catodon) [TaxId:9755] [188226] (7 PDB entries)
    31. 1077012Species Struthio camelus [TaxId:8801] [188835] (1 PDB entry)
    32. 1077017Species Thunnus atlanticus [TaxId:48168] [187921] (3 PDB entries)
    33. 1077021Species Thunnus orientalis [TaxId:8238] [187933] (1 PDB entry)
    34. 1077023Species Trema tomentosa [TaxId:3480] [196352] (1 PDB entry)
    35. 1077026Species Turkey (Meleagris gallopavo) [TaxId:9103] [189160] (2 PDB entries)
    36. 1077035Species Yellow perch (Perca flavescens) [TaxId:8167] [188574] (3 PDB entries)

More info for Family a.1.1.2: Globins

Timeline for Family a.1.1.2: Globins: