Lineage for Family a.1.1.2: Globins

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 901762Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 901763Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 901830Family a.1.1.2: Globins [46463] (27 proteins)
    Heme-binding protein

Proteins:

  1. 901831Ascaris hemoglobin, domain 1 [46520] (1 species)
  2. 901834Bacterial dimeric hemoglobin [46526] (1 species)
  3. 901844Chimeric hemoglobin beta-alpha [46516] (1 species)
  4. 901850Cytoglobin [109626] (1 species)
  5. 901863Dehaloperoxidase [46530] (1 species)
  6. 901897Erythrocruorin [46479] (1 species)
  7. 901903Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 [116758] (1 species)
  8. 901911Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B) [116754] (1 species)
  9. 901919Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) [116756] (1 species)
  10. 901927Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A) [116752] (1 species)
  11. 901935Flavohemoglobin, N-terminal domain [46528] (2 species)
    1. 901936Species Alcaligenes eutrophus [TaxId:106590] [46529] (1 PDB entry)
    2. 901939Species Escherichia coli [TaxId:562] [74663] (1 PDB entry)
  12. 901941Glycera globin [46467] (1 species)
  13. 901951Hagfish hemoglobin [68941] (1 species)
  14. 901959Heme-based aerotactic transducer HemAT, sensor domain [100980] (1 species)
  15. 901965Hemoglobin [46522] (1 species)
  16. 901969Hemoglobin I [46464] (2 species)
    1. 901970Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [46465] (35 PDB entries)
    2. 902053Species Clam (Lucina pectinata) [TaxId:244486] [46466] (4 PDB entries)
  17. 902058Hemoglobin, alpha-chain [46486] (22 species)
    1. 902059Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100976] (3 PDB entries)
      Uniprot P83134
    2. 902063Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46497] (6 PDB entries)
    3. 902073Species Bar-headed goose (Anser indicus) [TaxId:8846] [46493] (3 PDB entries)
    4. 902080Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109623] (3 PDB entries)
      Uniprot Q8AYM0
    5. 902087Species Canis lupus [TaxId:9615] [189534] (1 PDB entry)
    6. 902089Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46496] (2 PDB entries)
    7. 902092Species Chicken (Gallus gallus) [TaxId:9031] [46492] (1 PDB entry)
    8. 902095Species Cow (Bos taurus) [TaxId:9913] [46490] (11 PDB entries)
    9. 902118Species Deer (Odocoileus virginianus) [TaxId:9874] [46489] (1 PDB entry)
    10. 902121Species Donkey (Equus asinus) [TaxId:9793] [158217] (1 PDB entry)
      Uniprot P01959 1-141
      beta-chain sequences of donkey and horse hemoglobins are identical
    11. 902123Species Dusicyon thous [TaxId:9620] [186966] (1 PDB entry)
    12. 902126Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46495] (9 PDB entries)
    13. 902141Species Fish (Leiostomus xanthurus) [TaxId:59837] [46498] (1 PDB entry)
    14. 902143Species Graylag goose (Anser anser) [TaxId:8843] [68938] (1 PDB entry)
    15. 902146Species Horse (Equus caballus) [TaxId:9796] [46488] (14 PDB entries)
    16. 902166Species Houndshark (Mustelus griseus) [TaxId:89020] [46499] (2 PDB entries)
    17. 902171Species Human (Homo sapiens) [TaxId:9606] [46487] (200 PDB entries)
      Uniprot P69905 P01922 P01934 P01935
    18. 902564Species Human (Homo sapiens), zeta isoform [TaxId:9606] [68937] (1 PDB entry)
    19. 902567Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63440] (2 PDB entries)
    20. 902571Species Pig (Sus scrofa) [TaxId:9823] [46491] (2 PDB entries)
    21. 902576Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46494] (2 PDB entries)
    22. 902580Species Yellow perch (Perca flavescens) [TaxId:8167] [116749] (1 PDB entry)
      Uniprot P83270; 78% sequence identity
  18. 902583Hemoglobin, beta-chain [46500] (25 species)
    1. 902584Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100977] (3 PDB entries)
      Uniprot P83133
    2. 902588Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46513] (6 PDB entries)
    3. 902598Species Bar-headed goose (Anser indicus) [TaxId:8846] [46509] (3 PDB entries)
    4. 902605Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109624] (3 PDB entries)
      Uniprot Q8AYM1
    5. 902612Species Canis lupus familiaris [TaxId:9615] [158218] (1 PDB entry)
    6. 902615Species Canis lupus [TaxId:9615] [189535] (1 PDB entry)
    7. 902617Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46512] (2 PDB entries)
    8. 902620Species Chicken (Gallus gallus) [TaxId:9031] [46508] (1 PDB entry)
    9. 902623Species Cow (Bos taurus) [TaxId:9913] [46506] (11 PDB entries)
    10. 902646Species Deer (Odocoileus virginianus) [TaxId:9874] [46505] (1 PDB entry)
    11. 902649Species Donkey (Equus asinus) [TaxId:9793] [158216] (1 PDB entry)
      beta-chain sequences of donkey and horse hemoglobins are identical
    12. 902651Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46511] (9 PDB entries)
    13. 902666Species Fish (Leiostomus xanthurus) [TaxId:59837] [46514] (1 PDB entry)
    14. 902668Species Graylag goose (Anser anser) [TaxId:8843] [68940] (1 PDB entry)
    15. 902671Species Horse (Equus caballus) [TaxId:9796] [46504] (14 PDB entries)
    16. 902691Species Houndshark (Mustelus griseus) [TaxId:89020] [46515] (2 PDB entries)
    17. 902696Species Human (Homo sapiens) [TaxId:9606] [46501] (196 PDB entries)
      Uniprot P68871
    18. 903085Species Human (Homo sapiens), delta-chain [TaxId:9606] [116750] (2 PDB entries)
      Uniprot P02042
    19. 903090Species Human (Homo sapiens), embryonic gower II [TaxId:9606] [46503] (1 PDB entry)
    20. 903093Species Human fetus (Homo sapiens), gamma-chain [TaxId:9606] [46502] (3 PDB entries)
    21. 903100Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63441] (1 PDB entry)
    22. 903103Species Mouse (Mus musculus) [TaxId:10090] [68939] (1 PDB entry)
    23. 903106Species Pig (Sus scrofa) [TaxId:9823] [46507] (2 PDB entries)
    24. 903111Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46510] (2 PDB entries)
    25. 903115Species Yellow perch (Perca flavescens) [TaxId:8167] [116751] (4 PDB entries)
      Uniprot P83273; 86% sequence identity
  19. 903124Hemoglobin, different isoforms [46524] (1 species)
  20. 903128Hypothetical protein PA3967 [109628] (1 species)
  21. 903131Lamprey globin [46518] (2 species)
    1. 903132Species Lamprey (Lampetra fluviatilis) [TaxId:7748] [88966] (1 PDB entry)
    2. 903145Species Sea lamprey (Petromyzon marinus) [TaxId:7757] [46519] (4 PDB entries)
  22. 903171Leghemoglobin [46481] (2 species)
    1. 903172Species Soybean (Glycine max), isoform A [TaxId:3847] [46483] (2 PDB entries)
    2. 903177Species Yellow lupine (Lupinus luteus) [TaxId:3873] [46482] (17 PDB entries)
  23. 903195Myoglobin [46469] (9 species)
    1. 903196Species Asian elephant (Elephas maximus) [TaxId:9783] [46476] (1 PDB entry)
    2. 903198Species Common seal (Phoca vitulina) [TaxId:9720] [46472] (1 PDB entry)
    3. 903200Species Horse (Equus caballus) [TaxId:9796] [46474] (53 PDB entries)
    4. 903254Species Human (Homo sapiens) [TaxId:9606] [46475] (1 PDB entry)
    5. 903256Species Loggerhead sea turtle (Caretta caretta) [TaxId:8467] [46477] (2 PDB entries)
    6. 903259Species Pig (Sus scrofa) [TaxId:9823] [46473] (17 PDB entries)
    7. 903293Species Slug sea hare (Aplysia limacina) [TaxId:6502] [46471] (7 PDB entries)
    8. 903301Species Sperm whale (Physeter catodon) [TaxId:9755] [46470] (225 PDB entries)
      Uniprot P02185
    9. 903528Species Yellowfin tuna (Thunnus albacares) [TaxId:8236] [46478] (1 PDB entry)
  24. 903530Neuroglobin [100978] (2 species)
    1. 903531Species Human (Homo sapiens) [TaxId:9606] [100979] (1 PDB entry)
    2. 903536Species Mouse (Mus musculus) [TaxId:10090] [109625] (5 PDB entries)
      Uniprot Q9ER97
  25. 903542Non-symbiotic plant hemoglobin [46484] (1 species)
  26. 903550Trematode hemoglobin/myoglobin [63438] (1 species)
  27. 903555automated matches [190359] (30 species)
    not a true protein
    1. 903556Species Amphitrite ornata [TaxId:129555] [189339] (1 PDB entry)
    2. 903559Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [187427] (30 PDB entries)
    3. 903624Species Barley (Hordeum vulgare) [TaxId:4513] [187359] (1 PDB entry)
    4. 903633Species Brycon cephalus [TaxId:126311] [188621] (1 PDB entry)
    5. 903638Species Buffalo (Bubalus bubalis) [TaxId:89462] [188864] (1 PDB entry)
    6. 903643Species Camel (Camelus dromedarius) [TaxId:9838] [189249] (1 PDB entry)
    7. 903647Species Cat (Felis catus) [TaxId:9685] [188888] (4 PDB entries)
    8. 903660Species Coturnix japonica [TaxId:93934] [189557] (1 PDB entry)
    9. 903664Species Domestic pigeon (Columba livia) [TaxId:8932] [188616] (2 PDB entries)
    10. 903677Species Duck (Anas platyrhynchos) [TaxId:8839] [189063] (1 PDB entry)
    11. 903680Species Dusicyon thous [TaxId:9620] [187446] (1 PDB entry)
    12. 903682Species Goat (Capra hircus) [TaxId:9925] [188635] (2 PDB entries)
    13. 903695Species Guinea pig (Cavia porcellus) [TaxId:10141] [189281] (2 PDB entries)
    14. 903700Species Human (Homo sapiens) [TaxId:9606] [188371] (2 PDB entries)
    15. 903706Species Isurus oxyrinchus [TaxId:57983] [189618] (1 PDB entry)
    16. 903710Species Lepus europaeus [TaxId:9983] [189630] (1 PDB entry)
    17. 903714Species Maize (Zea mays) [TaxId:76912] [188014] (1 PDB entry)
    18. 903719Species Mouse (Mus musculus) [TaxId:10090] [187190] (2 PDB entries)
    19. 903724Species Norway rat (Rattus norvegicus) [TaxId:10116] [188924] (2 PDB entries)
    20. 903731Species Podocnemis unifilis [TaxId:227871] [189922] (2 PDB entries)
    21. 903736Species Pteropus giganteus [TaxId:143291] [188768] (1 PDB entry)
    22. 903739Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [188592] (1 PDB entry)
    23. 903744Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [188309] (2 PDB entries)
    24. 903753Species Sheep (Ovis aries) [TaxId:9940] [188522] (1 PDB entry)
    25. 903758Species Sperm whale (Physeter catodon) [TaxId:9755] [188226] (4 PDB entries)
    26. 903763Species Struthio camelus [TaxId:8801] [188835] (1 PDB entry)
    27. 903768Species Thunnus atlanticus [TaxId:48168] [187921] (2 PDB entries)
    28. 903771Species Thunnus orientalis [TaxId:8238] [187933] (1 PDB entry)
    29. 903773Species Turkey (Meleagris gallopavo) [TaxId:9103] [189160] (2 PDB entries)
    30. 903778Species Yellow perch (Perca flavescens) [TaxId:8167] [188574] (3 PDB entries)

More info for Family a.1.1.2: Globins

Timeline for Family a.1.1.2: Globins: