SCOPe 2.08: Family a.1.1.1: Truncated hemoglobin

Lineage for Family a.1.1.1: Truncated hemoglobin

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.1: Globin-like [46457] (2 superfamilies)
   core: 6 helices; folded leaf, partly opened

4. Superfamily a.1.1: Globin-like [46458] (5 families)

5. Family a.1.1.1: Truncated hemoglobin [46459] (2 proteins)
   lack the first helix (A)

Proteins:

1. Protozoan/bacterial hemoglobin [46460] (6 species)

   1. Species Bacillus subtilis [TaxId:1423] [116748] (1 PDB entry)
      Uniprot O31607 6-124 # YjbI

   2. Species Ciliate (Paramecium caudatum) [TaxId:5885] [46461] (2 PDB entries)

   3. Species Green alga (Chlamydomonas eugametos) [TaxId:3054] [46462] (2 PDB entries)
      Globin li637

   4. Species Mycobacterium tuberculosis, HbN [TaxId:1773] [63437] (8 PDB entries)
      Uniprot Q10784

   5. Species Mycobacterium tuberculosis, HbO [TaxId:1773] [88965] (2 PDB entries)

   6. Species Synechocystis sp. PCC 6803 [TaxId:1148] [81667] (7 PDB entries)
      Uniprot P73925

2. automated matches [190322] (4 species)
   not a true protein

   1. Species Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [333034] (3 PDB entries)

   2. Species Geobacillus stearothermophilus [TaxId:1422] [187467] (1 PDB entry)

   3. Species Synechococcus sp. [TaxId:32049] [194261] (4 PDB entries)

   4. Species Thermobifida fusca [TaxId:2021] [187474] (1 PDB entry)

More info for Family a.1.1.1: Truncated hemoglobin

Timeline for Family a.1.1.1: Truncated hemoglobin:

• Family a.1.1.1: Truncated hemoglobin first appeared (with stable ids) in SCOP 1.55
  
• Family a.1.1.1: Truncated hemoglobin appears in SCOPe 2.07