Lineage for d1f6ua_ (1f6u A:)

  1. Root: SCOPe 2.07
  2. 2634415Class g: Small proteins [56992] (98 folds)
  3. 2640942Fold g.40: Retrovirus zinc finger-like domains [57755] (1 superfamily)
    metal(zinc)-bound fold
  4. 2640943Superfamily g.40.1: Retrovirus zinc finger-like domains [57756] (1 family) (S)
  5. 2640944Family g.40.1.1: Retrovirus zinc finger-like domains [57757] (6 proteins)
  6. 2640948Protein HIV nucleocapsid [57760] (2 species)
    duplication: two similar zinc-binding motifs
  7. 2640949Species Human immunodeficiency virus type 1, different isolates [TaxId:11676] [57761] (12 PDB entries)
    Uniprot P03350 389-429
  8. 2640958Domain d1f6ua_: 1f6u A: [45164]
    protein/RNA complex; complexed with zn

Details for d1f6ua_

PDB Entry: 1f6u (more details)

PDB Description: nmr structure of the hiv-1 nucleocapsid protein bound to stem-loop sl2 of the psi-rna packaging signal. implications for genome recognition
PDB Compounds: (A:) hiv-1 nucleocapsid protein

SCOPe Domain Sequences for d1f6ua_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1f6ua_ g.40.1.1 (A:) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
mqkgnfrnqrktvkcfncgkeghiakncraprkkgcwkcgkeghqmkdcterqan

SCOPe Domain Coordinates for d1f6ua_:

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Timeline for d1f6ua_: