Lineage for d1hvoe_ (1hvo E:)

  1. Root: SCOPe 2.08
  2. 3029608Class g: Small proteins [56992] (100 folds)
  3. 3036238Fold g.40: Retrovirus zinc finger-like domains [57755] (1 superfamily)
    metal(zinc)-bound fold
  4. 3036239Superfamily g.40.1: Retrovirus zinc finger-like domains [57756] (1 family) (S)
  5. 3036240Family g.40.1.1: Retrovirus zinc finger-like domains [57757] (6 proteins)
  6. 3036244Protein HIV nucleocapsid [57760] (2 species)
    duplication: two similar zinc-binding motifs
  7. 3036245Species Human immunodeficiency virus type 1, different isolates [TaxId:11676] [57761] (12 PDB entries)
    Uniprot P03350 389-429
  8. 3036249Domain d1hvoe_: 1hvo E: [45162]
    protein/DNA complex; complexed with zn
    fragment; missing more than one-third of the common structure and/or sequence

Details for d1hvoe_

PDB Entry: 1hvo (more details)

PDB Description: zinc-and sequence-dependent binding to nucleic acids by the n-terminal zinc finger domain of the hiv-1 nucleocapsid protein: nmr structure of the complex with the psi-site analog, d/acgcc
PDB Compounds: (E:) Hiv-1 Nucleocapsid Zinc Finger

SCOPe Domain Sequences for d1hvoe_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1hvoe_ g.40.1.1 (E:) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
vkcfncgkeghiarncra

SCOPe Domain Coordinates for d1hvoe_:

Click to download the PDB-style file with coordinates for d1hvoe_.
(The format of our PDB-style files is described here.)

Timeline for d1hvoe_: