SCOPe 2.08: Domain d1fvfb_: 1fvf B:

Lineage for d1fvfb_ (1fvf B:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.25: Sec1/munc18-like (SM) proteins [56814] (1 superfamily)
   3 domains: (1 and 2) alpha+beta; (3) mostly alpha, inserted in domain 2

4. Superfamily e.25.1: Sec1/munc18-like (SM) proteins [56815] (1 family)
   automatically mapped to Pfam PF00995

5. Family e.25.1.1: Sec1/munc18-like (SM) proteins [56816] (3 proteins)

6. Protein Neuronal Sec1, NSec1 [56817] (2 species)

7. Species Longfin inshore squid (Loligo pealei) [TaxId:6621] [56819] (3 PDB entries)

8. Domain d1fvfb_: 1fvf B: [43361]

Details for d1fvfb_

PDB Entry: 1fvf, 3.2 Å

PDB Description: crystal structure analysis of neuronal sec1 from the squid l. pealei

PDB Compounds: (B:) sec1

SCOPe Domain Sequences for d1fvfb_:

Sequence, based on SEQRES records:

>d1fvfb_ e.25.1.1 (B:) Neuronal Sec1, NSec1 {Longfin inshore squid (Loligo pealei) [TaxId: 6621]}
alktavhekimndvvlavkknaewkvlivdqlsmrmvsacckmheimsegitlvedinrr
replplleavylitpteesvkclmadfqnpdnpqyrgahiffteacpeelfkelckstta
rfiktlkeiniaflpyesqifsldspdtfqvyynpsraqggipnkercaeqiatlcatlg
eypsvryrsdfdenasfaqlvqqkldayraddptmgegpqkdrsqllildrgfdpispll
heltfqamaydllpiendvykyvntggnevpekevlldekddlwvemrhqhiavvsqnvt
kklkqfadekrmgtaadkagikdlsqmlkkmpqyqkelskysthlhlaedcmkqyqqhvd
klckveqdlamgtdadgekirdhmrnivpilldqkisaydkiriillyiihkggiseenl
aklvqhahipaeekwiindmqnlgvpiiqdggrrkipqpyhthnrkerqadhtyqmsrwt
pymkdimeaavedkldtrhypflngggprpscqqpvsvryghwhkdkgqasyksgprlii
fvvggisysemrsayevtqtaknnwevilgsthiltpegllrdlrkisnp

Sequence, based on observed residues (ATOM records):

>d1fvfb_ e.25.1.1 (B:) Neuronal Sec1, NSec1 {Longfin inshore squid (Loligo pealei) [TaxId: 6621]}
alktavhekimndvvlavkknaewkvlivdqlsmrmvsacckmheimsegitlvedinrr
replplleavylitpteesvkclmadfqnpdnpqyrgahiffteacpeelfkelckstta
rfiktlkeiniaflpyesqifsldspdtfqvyynpsraqggipnkercaeqiatlcatlg
eypsvryrsdfdenasfaqlvqqkldayraddptmgegpqkdrsqllildrgfdpispll
heltfqamaydllpiendvykyvekevlldekddlwvemrhqhiavvsqnvtkklkqfad
ekrlsqmlkkmpqyqkelskysthlhlaedcmkqyqqhvdklckveqdlamgtdadgeki
rdhmrnivpilldqkisaydkiriillyiihkggiseenlaklvqhahipaeekwiindm
qnlgvpiiqdggrrkipqpyhthnrkerqadhtyqmsrwtpymkdimeaavedkldtrhy
pflnggggprliifvvggisysemrsayevtqtaknnwevilgsthiltpegllrdlrki
snp

Timeline for d1fvfb_:

• d1fvfb_ first appeared (with stable ids) in SCOP 1.55
  
• d1fvfb_ appears in SCOPe 2.07