SCOPe 2.07: Domain d1h2rl_: 1h2r L:

Lineage for d1h2rl_ (1h2r L:)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)

6. Protein Nickel-iron hydrogenase, large subunit [56764] (5 species)

7. Species Desulfovibrio vulgaris [TaxId:881] [56766] (11 PDB entries)

8. Domain d1h2rl_: 1h2r L: [43298]
   Other proteins in same PDB: d1h2rs_
   complexed with f3s, mg, nfe, sf4

Details for d1h2rl_

PDB Entry: 1h2r, 1.4 Å

PDB Description: three-dimensional structure of ni-fe hydrogenase from desulfivibrio vulgaris miyazaki f in the reduced form at 1.4 a resolution

PDB Compounds: (L:) protein (periplasmic [nife] hydrogenase large subunit)

SCOPe Domain Sequences for d1h2rl_:

Sequence; same for both SEQRES and ATOM records:

>d1h2rl_ e.18.1.1 (L:) Nickel-iron hydrogenase, large subunit {Desulfovibrio vulgaris [TaxId: 881]}
ssysgpivvdpvtrieghlrievevengkvknayssstlfrgleiilkgrdprdaqhftq
rtcgvctythalastrcvdnavgvhipknatyirnlvlgaqylhdhivhfyhlhaldfvd
vtaalkadpakaakvassisprkttaadlkavqdklktfvetgqlgpftnayflgghpay
yldpetnliatahylealrlqvkaaramavfgaknphtqftvvggvtcydaltpqriaef
ealwketkafvdevyipdllvvaaaykdwtqyggtdnfitfgefpkdeydlnsrffkpgv
vfkrdfknikpfdkmqieehvrhswyegaearhpwkgqtqpkytdlhgddryswmkapry
mgepmetgplaqvliaysqghpkvkavtdavlaklgvgpealfstlgrtaargietavia
eyvgvmlqeykdniakgdnvicapwempkqaegvgfvnaprgglshwiriedgkignfql
vvpstwtlgprcdknnvspveasligtpvadakrpveilrtvhsfdpciacgvh

Timeline for d1h2rl_:

• d1h2rl_ first appeared (with stable ids) in SCOP 1.55
  
• d1h2rl_ appears in SCOPe 2.06
  
• d1h2rl_ appears in the current release, SCOPe 2.08