SCOPe 2.07: Domain d1rdra_: 1rdr A:

Lineage for d1rdra_ (1rdr A:)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)

6. Protein Viral RNA polymerase [56695] (17 species)

7. Species Poliovirus type 1, strain Mahoney [TaxId:12080] [56696] (12 PDB entries)
   Uniprot P03300 1748-2208

8. Domain d1rdra_: 1rdr A: [43116]
   complexed with ca

Details for d1rdra_

PDB Entry: 1rdr, 2.4 Å

PDB Description: poliovirus 3d polymerase

PDB Compounds: (A:) poliovirus 3d polymerase

SCOPe Domain Sequences for d1rdra_:

Sequence, based on SEQRES records:

>d1rdra_ e.8.1.4 (A:) Viral RNA polymerase {Poliovirus type 1, strain Mahoney [TaxId: 12080]}
vgypiinapsktklepsafhyvfegvkepavltkndprlktdfeeaifskyvgnkitevd
eymkeavdhyagqlmsldinteqmcledamygtdglealdlstsagypyvamgkkkrdil
nkqtrdtkemqklldtyginlplvtyvkdelrsktkveqgksrlieasslndsvamrmaf
gnlyaafhknpgvitgsavgcdpdlfwskipvlmeeklfafdytgydaslspawfealkm
vlekigfgdrvdyidylnhshhlyknktycvkggmpsgcsgtsifnsminnliirtlllk
tykgidldhlkmiaygddviasyphevdasllaqsgkdygltmtpadksatfetvtwenv
tflkrffradekypflihpvmpmkeihesirwtkdprntqdhvrslcllawhngeeeynk
flakirsvpigralllpeystlyrrwldsf

Sequence, based on observed residues (ATOM records):

>d1rdra_ e.8.1.4 (A:) Viral RNA polymerase {Poliovirus type 1, strain Mahoney [TaxId: 12080]}
vgypiinapsktklepsafhyvfegvitevdeymkeavdhyagqlmsldinteqmclnds
vamrmafgnlyaafhknpgvitgsavgcdpdlfwskipvlmeeklfafdytgydaslspa
wfealkmvlekigfgdrvdyidylnsgtsifnsminnliirtlllktykgidldhlkmia
ygddviasyphevdasllaqsgkdygltmtpadksatfetvtwenvtflkrffradekyp
flihpvmpmkeihesirwtkdprntqdhvrslcllawhngeeeynkflakirsvpigral
llpeystlyrrwldsf

Timeline for d1rdra_:

• d1rdra_ first appeared (with stable ids) in SCOP 1.55, called d1rdr__
  
• d1rdra_ appears in SCOPe 2.06
  
• d1rdra_ appears in the current release, SCOPe 2.08