SCOPe 2.04: Domain d2ktqa2: 2ktq A:423-832

Lineage for d2ktqa2 (2ktq A:423-832)

1. Root: SCOPe 2.04

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.1: DNA polymerase I [56673] (5 proteins)

6. Protein DNA polymerase I (Klenow fragment) [56674] (3 species)

7. Species Thermus aquaticus [TaxId:271] [56676] (24 PDB entries)

8. Domain d2ktqa2: 2ktq A:423-832 [42995]
   Other proteins in same PDB: d2ktqa1
   protein/DNA complex; complexed with dct, mg

Details for d2ktqa2

PDB Entry: 2ktq, 2.3 Å

PDB Description: open ternary complex of the large fragment of dna polymerase i from thermus aquaticus

PDB Compounds: (A:) protein (large fragment of DNA polymerase I)

SCOPe Domain Sequences for d2ktqa2:

Sequence, based on SEQRES records:

>d2ktqa2 e.8.1.1 (A:423-832) DNA polymerase I (Klenow fragment) {Thermus aquaticus [TaxId: 271]}
eerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpf
nlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltklk
styidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqnipvrtplgqrirrafiaee
gwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraa
ktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvet
lfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllq
vhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake

Sequence, based on observed residues (ATOM records):

>d2ktqa2 e.8.1.1 (A:423-832) DNA polymerase I (Klenow fragment) {Thermus aquaticus [TaxId: 271]}
eerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpf
nlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltklk
styidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqnipvrtplgqrirrafiaee
gwllvaldysqielrvlahlsgdenlirvfqegrdihtetasdplmrraaktinfgvlyg
msahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpd
learvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvhdelvleap
keraeavarlakevmegvyplavplevevgigedwlsake

Timeline for d2ktqa2:

• d2ktqa2 first appeared (with stable ids) in SCOP 1.55
  
• d2ktqa2 appears in SCOPe 2.03
  
• d2ktqa2 appears in SCOPe 2.05
  
• d2ktqa2 appears in the current release, SCOPe 2.08