Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.1: DNA polymerase I [56673] (5 proteins) |
Protein DNA polymerase I (Klenow fragment) [56674] (3 species) |
Species Escherichia coli [TaxId:562] [56675] (14 PDB entries) |
Domain d1kspa2: 1ksp A:519-928 [42980] Other proteins in same PDB: d1kspa1 protein/DNA complex; complexed with zn; mutant |
PDB Entry: 1ksp (more details), 2.3 Å
SCOPe Domain Sequences for d1kspa2:
Sequence, based on SEQRES records: (download)
>d1kspa2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment) {Escherichia coli [TaxId: 562]} hkgplnvfeniemplvpvlsrierngvkidpkvlhnhseeltlrlaelekkaheiageef nlsstkqlqtilfekqgikplkktpggapstseevleelaldyplpkvileyrglaklks tytdklplminpktgrvhtsyhqavtatgrlsstdpnlqnipvrneegrrirqafiaped yvivsadysqielrimahlsrdkglltafaegkdihrataaevfglpletvtseqrrsak ainfgliygmsafglarqlniprkeaqkymdlyferypgvleymertraqakeqgyvetl dgrrlylpdikssngarraaaeraainapmqgtaadiikramiavdawlqaeqprvrmim qvhdelvfevhkddvdavakqihqlmenctrldvpllvevgsgenwdqah
>d1kspa2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment) {Escherichia coli [TaxId: 562]} hkgplnvfeniemplvpvlsrierngvkidpkvlhnhseeltlrlaelekkaheiageef nlsstkqlqtilfekqgikplkktpstseevleelaldyplpkvileyrglaklkstytd klplminpktgrvhtsyhqavtatgrlsstdpnlqnipvrneegrrirqafiapedyviv sadysqielrimahlsrdkglltafaegkdihrataaevfglpletvtseqrrsakainf gliygmsafglarqlniprkeaqkymdlyferypgvleymertraqakeqgyvetldgrr lylpdikssngarraaaeraainapmqgtaadiikramiavdawlqaeqprvrmimqvhd elvfevhkddvdavakqihqlmenctrldvpllvevgsgenwdqah
Timeline for d1kspa2: