SCOP 1.63: Domain d2kfna2: 2kfn A:519-928

Lineage for d2kfna2 (2kfn A:519-928)

1. Root: SCOP 1.63

2. Class e: Multi-domain proteins (alpha and beta) [56572] (39 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.1: DNA polymerase I [56673] (3 proteins)

6. Protein DNA polymerase I (Klenow fragment) [56674] (3 species)

7. Species Escherichia coli [TaxId:562] [56675] (14 PDB entries)

8. Domain d2kfna2: 2kfn A:519-928 [42975]
   Other proteins in same PDB: d2kfna1
   protein/DNA complex; complexed with mg, mn, s, zn

Details for d2kfna2

PDB Entry: 2kfn, 2.03 Å

PDB Description: klenow fragment with bridging-sulfur substrate and manganese

SCOP Domain Sequences for d2kfna2:

Sequence, based on SEQRES records:

>d2kfna2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment) {Escherichia coli}
hkgplnvfeniemplvpvlsrierngvkidpkvlhnhseeltlrlaelekkaheiageef
nlsstkqlqtilfekqgikplkktpggapstseevleelaldyplpkvileyrglaklks
tytdklplminpktgrvhtsyhqavtatgrlsstdpnlqnipvrneegrrirqafiaped
yvivsadysqielrimahlsrdkglltafaegkdihrataaevfglpletvtseqrrsak
ainfgliygmsafglarqlniprkeaqkymdlyferypgvleymertraqakeqgyvetl
dgrrlylpdikssngarraaaeraainapmqgtaadiikramiavdawlqaeqprvrmim
qvhdelvfevhkddvdavakqihqlmenctrldvpllvevgsgenwdqah

Sequence, based on observed residues (ATOM records):

>d2kfna2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment) {Escherichia coli}
hkgplnvfeniemplvpvlsrierngvkidpkvlhnhseeltlrlaelekkaheiageef
nlsstkqlqtilfekqgikplkktpstseevleelaldyplpkvileyrglaklkstytd
klplminpktgrvhtsyhqavtatgrlsstdpnlqnipvrneegrrirqafiapedyviv
sadysqielrimahlsrdkglltafaegkdihrataaevfglpletvtseqrrsakainf
gliygmsafglarqlniprkeaqkymdlyferypgvleymertraqakeqgyvetldgrr
lylpdikssngarraaaeraainapmqgtaadiikramiavdawlqaeqprvrmimqvhd
elvfevhkddvdavakqihqlmenctrldvpllvevgsgenwdqah

Timeline for d2kfna2:

• d2kfna2 first appeared (with stable ids) in SCOP 1.55
  
• d2kfna2 appears in SCOP 1.61
  
• d2kfna2 appears in SCOP 1.65
  
• d2kfna2 appears in the current release, SCOPe 2.08