Lineage for d8aqld_ (8aql D:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2895166Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2895167Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2896011Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
    formerly omega-Aminoacid:pyruvate aminotransferase-like
  6. 2896255Protein Serine hydroxymethyltransferase [53429] (7 species)
  7. 2896310Species Human (Homo sapiens), mitochondrial [TaxId:9606] [142671] (9 PDB entries)
    Uniprot P34897 42-504
  8. 3087051Domain d8aqld_: 8aql D: [423368]
    automated match to d2a7va_
    complexed with edo, plg

Details for d8aqld_

PDB Entry: 8aql (more details), 1.23 Å

PDB Description: high-resolution crystal structure of human shmt2
PDB Compounds: (D:) Serine hydroxymethyltransferase, mitochondrial

SCOPe Domain Sequences for d8aqld_:

Sequence, based on SEQRES records: (download)

>d8aqld_ c.67.1.4 (D:) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
wtgqeslsdsdpemwellqrekdrqcrgleliasenfcsraalealgsclnnkysegypg
kryyggaevvdeiellcqrraleafdldpaqwgvnvqpysgspanlavytallqphdrim
gldlpdgghlthgymsdvkrisatsiffesmpyklnpktglidynqlaltarlfrprlii
agtsayarlidyarmrevcdevkahlladmahisglvaakvipspfkhadivtttthktl
rgarsglifyrkgvkavdpktgreipytfedrinfavfpslqggphnhaiaavavalkqa
ctpmfreyslqvlknaramadallergyslvsggtdnhlvlvdlrpkgldgaraervlel
vsitankntcpgdrsaitpgglrlgapaltsrqfreddfrrvvdfidegvniglevkskt
aklqdfksfllkdsetsqrlanlrqrveqfarafpmpgfdeh

Sequence, based on observed residues (ATOM records): (download)

>d8aqld_ c.67.1.4 (D:) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
wtgqeslsdsdpemwellqrekdrqcrgleliasenfcsraalealgsclnnkysegypg
kryyggaevvdeiellcqrraleafdldpaqwgvnvqpysgspanlavytallqphdrim
gldlpdgghlthgymsdvkrisatsiffesmpyklnpktglidynqlaltarlfrprlii
agtsayarlidyarmrevcdevkahlladmahisglvaakvipspfkhadivtttthktl
rgarsglifyrkgvkipytfedrinfavfpslqggphnhaiaavavalkqactpmfreys
lqvlknaramadallergyslvsggtdnhlvlvdlrpkgldgaraervlelvsitanknt
cpgdrsaitpgglrlgapaltsrqfreddfrrvvdfidegvniglevksktaklqdfksf
llkdsetsqrlanlrqrveqfarafpmpgfdeh

SCOPe Domain Coordinates for d8aqld_:

Click to download the PDB-style file with coordinates for d8aqld_.
(The format of our PDB-style files is described here.)

Timeline for d8aqld_:

  • d8aqld_ is new in SCOPe 2.08-stable