Lineage for d7ke0a_ (7ke0 A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2883383Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2885833Superfamily c.55.3: Ribonuclease H-like [53098] (18 families) (S)
    consists of one domain of this fold
  5. 2886113Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins)
    Pfam PF00665
  6. 2886114Protein Retroviral integrase, catalytic domain [53108] (5 species)
  7. 2886120Species Human immunodeficiency virus type 1 [TaxId:11676] [53110] (74 PDB entries)
  8. 3085684Domain d7ke0a_: 7ke0 A: [422001]
    automated match to d3vq9c_
    complexed with wbv

Details for d7ke0a_

PDB Entry: 7ke0 (more details), 2.19 Å

PDB Description: hiv-1 integrase catalytic core domain complexed with allosteric inhibitor stp03-0404
PDB Compounds: (A:) integrase

SCOPe Domain Sequences for d7ke0a_:

Sequence, based on SEQRES records: (download)

>d7ke0a_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd
ngsnftsttvkaacwwagikqefgipynpqsqgviesmnkelkkiigqvrdqaehlktav
qmavfihnhkrkggiggysagerivdiiatd

Sequence, based on observed residues (ATOM records): (download)

>d7ke0a_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd
ngsnftsttvkaacwwagikqesmnkelkkiigqvrdqaehlktavqmavfihnhkrgys
agerivdiiatd

SCOPe Domain Coordinates for d7ke0a_:

Click to download the PDB-style file with coordinates for d7ke0a_.
(The format of our PDB-style files is described here.)

Timeline for d7ke0a_:

  • d7ke0a_ is new in SCOPe 2.08-stable