SCOPe 2.08: Domain d9gafc_: 9gaf C:

Lineage for d9gafc_ (9gaf C:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.5: (Glycosyl)asparaginase [56261] (2 proteins)
   automatically mapped to Pfam PF01112

6. Protein Glycosylasparaginase (aspartylglucosaminidase, AGA) [56262] (5 species)
   the precursor chain is cleaved onto 2 fragments by autoproteolysis

7. Species Flavobacterium meningosepticum [TaxId:238] [56264] (8 PDB entries)

8. Domain d9gafc_: 9gaf C: [42009]
   Precursor W11F mutant
   complexed with gly; mutant

Details for d9gafc_

PDB Entry: 9gaf, 1.9 Å

PDB Description: precursor of the w11f mutant glycosylasparaginase from flavobacterium meningosepticum

PDB Compounds: (C:) protein (glycosylasparaginase)

SCOPe Domain Sequences for d9gafc_:

Sequence, based on SEQRES records:

>d9gafc_ d.153.1.5 (C:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Flavobacterium meningosepticum [TaxId: 238]}
ttnkpivlstfnfglhanveawkvlskggkaldavekgvrlveddptersvgyggrpdrd
grvtldacimdenynigsvacmehiknpisvaravmektphvmlvgdgalefalsqgfkk
enlltaesekewkewlktsqykpivnienhdtigmialdaqgnlsgacttsgmaykmhgr
vgdspiigaglfvdneigaatatghgeevirtvgthlvvelmnqgrtpqqackeaveriv
kivnrrgknlkdiqvgfialnkkgeygayciqdgfnfavhdqkgnrletpgfalk

Sequence, based on observed residues (ATOM records):

>d9gafc_ d.153.1.5 (C:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Flavobacterium meningosepticum [TaxId: 238]}
ttnkpivlstfnfglhanveawkvlskggkaldavekgvrlveddptersvgyggrpdrd
grvtldacimdenynigsvacmehiknpisvaravmektphvmlvgdgalefalsqgfkk
enlltaesekewkewlkykpivnienhdtigmialdaqgnlsgacttsgmaykmhgrvgd
spiigaglfvdneigaatatghgeevirtvgthlvvelmnqgrtpqqackeaverivkiv
nrrgknlkdiqvgfialnkkgeygayciqdgfnfavhdqkgnrletpgfalk

Timeline for d9gafc_:

• d9gafc_ first appeared (with stable ids) in SCOP 1.55
  
• d9gafc_ appears in SCOPe 2.07