Lineage for Species: Human norovirus - alphatron [TaxId: 106516]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2822534Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2822535Protein automated matches [190988] (51 species)
    not a true protein
  7. 2822673Species Human norovirus - alphatron [TaxId:106516] [420024] (4 PDB entries)

PDB entries in Species: Human norovirus - alphatron [TaxId: 106516]:

  1. Domain(s) for 6jyn:
    1. 2822674Domain d6jyna_: 6jyn A: [416267]
      automated match to d5or7a_
    2. 2822675Domain d6jynb_: 6jyn B: [416268]
      automated match to d5or7a_
    3. 2822676Domain d6jync_: 6jyn C: [416269]
      automated match to d5or7a_
    4. 2822677Domain d6jynd_: 6jyn D: [416270]
      automated match to d5or7a_
  2. Domain(s) for 6jyo:
    1. 2822682Domain d6jyoa_: 6jyo A: [416271]
      automated match to d5or7a_
    2. 2822683Domain d6jyob_: 6jyo B: [416272]
      automated match to d5or7a_
    3. 2822684Domain d6jyoc_: 6jyo C: [416273]
      automated match to d5or7a_
    4. 2822685Domain d6jyod_: 6jyo D: [416274]
      automated match to d5or7a_
  3. Domain(s) for 6jyr:
    1. 2822686Domain d6jyra_: 6jyr A: [416275]
      automated match to d5or7a_
      complexed with gol
    2. 2822687Domain d6jyrb_: 6jyr B: [416276]
      automated match to d5or7a_
      complexed with gol
    3. 2822688Domain d6jyrc_: 6jyr C: [416277]
      automated match to d5or7a_
      complexed with gol
    4. 2822689Domain d6jyrd_: 6jyr D: [416278]
      automated match to d5or7a_
      complexed with gol
  4. Domain(s) for 6jys:
    1. 2822678Domain d6jysa_: 6jys A: [416279]
      automated match to d5or7a_
      complexed with a2g, gal, nag, thr
    2. 2822679Domain d6jysb_: 6jys B: [416280]
      automated match to d5or7a_
      complexed with a2g, gal, nag, thr
    3. 2822680Domain d6jysc_: 6jys C: [416281]
      automated match to d5or7a_
      complexed with a2g, gal, nag, thr
    4. 2822681Domain d6jysd_: 6jys D: [416282]
      automated match to d5or7a_
      complexed with a2g, gal, nag, thr

More info for Species Human norovirus - alphatron [TaxId:106516] from b.121.4.0 automated matches

Timeline for Species Human norovirus - alphatron [TaxId:106516] from b.121.4.0 automated matches:

  • Species Human norovirus - alphatron [TaxId:106516] from b.121.4.0 automated matches is new in SCOPe 2.08-stable