SCOPe 2.08: Species: Thermus thermophilus [TaxId: 300852]

Lineage for Species: Thermus thermophilus [TaxId: 300852]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
Similar in architecture to the superfamily I but partly differs in topology
Family c.94.1.0: automated matches [191309] (1 protein)
not a true family
Protein automated matches [190039] (161 species)
not a true protein
Species Thermus thermophilus [TaxId:300852] [420023] (34 PDB entries)

PDB entries in Species: Thermus thermophilus [TaxId: 300852]:

Domain(s) for 6j9w:
- Domain d6j9wa1: 6j9w A:3-402 [416206]
  Other proteins in same PDB: d6j9wa2
  automated match to d6dtqa_
  complexed with cit, edo, glc
Domain(s) for 6j9y:
- Domain d6j9ya1: 6j9y A:3-402 [416208]
  Other proteins in same PDB: d6j9ya2
  automated match to d6dtqa_
  complexed with cit, co3, edo, glc
Domain(s) for 6jad:
- Domain d6jada1: 6jad A:3-402 [416210]
  Other proteins in same PDB: d6jada2
  automated match to d6dtqa_
  complexed with cit
Domain(s) for 6jag:
- Domain d6jaga1: 6jag A:3-402 [416212]
  Other proteins in same PDB: d6jaga2
  automated match to d6dtqa_
  complexed with cit, fru, glc, gol
Domain(s) for 6jah:
- Domain d6jaha1: 6jah A:3-402 [416214]
  Other proteins in same PDB: d6jaha2
  automated match to d6dtqa_
  complexed with ba6, ba9, cit, edo, glc, peg
Domain(s) for 6jai:
- Domain d6jaia1: 6jai A:3-402 [416216]
  Other proteins in same PDB: d6jaia2
  automated match to d6dtra_
  complexed with act, ca, cit, edo, glc; mutant
Domain(s) for 6jam:
- Domain d6jama1: 6jam A:1-402 [416218]
  Other proteins in same PDB: d6jama2
  automated match to d6dtqa_
  complexed with act, cit, edo, glc, peg; mutant
Domain(s) for 6jan:
- Domain d6jana1: 6jan A:3-402 [416220]
  Other proteins in same PDB: d6jana2
  automated match to d6dtqa_
  complexed with cit, edo, glc, gol; mutant
Domain(s) for 6jao:
- Domain d6jaoa1: 6jao A:3-402 [416222]
  Other proteins in same PDB: d6jaoa2
  automated match to d6dtqa_
  complexed with act, cit, edo; mutant
Domain(s) for 6jap:
- Domain d6japa1: 6jap A:3-402 [416224]
  Other proteins in same PDB: d6japa2
  automated match to d6dtqa_
  complexed with cit, edo, fru, glc, gol; mutant
Domain(s) for 6jaq:
- Domain d6jaqa1: 6jaq A:3-402 [416226]
  Other proteins in same PDB: d6jaqa2
  automated match to d6dtqa_
  complexed with cit, edo, glc, gol; mutant
Domain(s) for 6jar:
- Domain d6jara1: 6jar A:3-402 [416228]
  Other proteins in same PDB: d6jara2
  automated match to d6dtqa_
  complexed with cit, edo, glc, peg; mutant
Domain(s) for 6jaz:
- Domain d6jaza1: 6jaz A:3-402 [416230]
  Other proteins in same PDB: d6jaza2
  automated match to d6dtra_
  complexed with cit, edo, glc; mutant
Domain(s) for 6jb0:
- Domain d6jb0a1: 6jb0 A:3-402 [416232]
  Other proteins in same PDB: d6jb0a2
  automated match to d6dtqa_
  complexed with cit, edo, glc, gol, pdo; mutant
Domain(s) for 6jb4:
- Domain d6jb4a1: 6jb4 A:3-402 [416234]
  Other proteins in same PDB: d6jb4a2
  automated match to d6dtqa_
  complexed with cit, co2, edo, glc, gol; mutant
Domain(s) for 6jba:
- Domain d6jbaa1: 6jba A:3-402 [416236]
  Other proteins in same PDB: d6jbaa2
  automated match to d6dtqa_
  complexed with cit, edo; mutant
Domain(s) for 6jbb:
- Domain d6jbba1: 6jbb A:3-402 [416238]
  Other proteins in same PDB: d6jbba2
  automated match to d6dtqa_
  complexed with cit, co3, edo, fru, glc, gol; mutant
Domain(s) for 6jbe:
- Domain d6jbea1: 6jbe A:3-402 [416240]
  Other proteins in same PDB: d6jbea2
  automated match to d6dtqa_
  complexed with cit, co2, edo, glc, gol, peg; mutant
Domain(s) for 7c0f:
1. Domain d7c0fa_: 7c0f A: [417683]
  automated match to d7bvta_
  complexed with 1pe, cl, co2, edo, fgo, gol, pdo, peg, pg4, pgo, pgr, po2
2. Domain d7c0fb_: 7c0f B: [417684]
  automated match to d7bvta_
  complexed with 1pe, cl, co2, edo, fgo, gol, pdo, peg, pg4, pgo, pgr, po2
Domain(s) for 7c0k:
- Domain d7c0ka1: 7c0k A:1-395 [417685]
  Other proteins in same PDB: d7c0ka2
  automated match to d7bvta_
  complexed with bgq, cl, co2, co3, edo, fgo, gol, na, pdo, pg4, po2, po3, po4
Domain(s) for 7c0l:
1. Domain d7c0la_: 7c0l A: [417687]
  automated match to d7bvta_
  complexed with cl, co2, edo, fgo, gol, so2, so3
2. Domain d7c0lb_: 7c0l B: [417688]
  automated match to d7bvta_
  complexed with cl, co2, edo, fgo, gol, so2, so3
Domain(s) for 7c0o:
1. Domain d7c0oa1: 7c0o A:1-396 [417689]
  Other proteins in same PDB: d7c0oa2, d7c0ob2
  automated match to d7bvta_
  complexed with co2, co3, edo, fgo, gol, na, peg
2. Domain d7c0ob1: 7c0o B:1-396 [417691]
  Other proteins in same PDB: d7c0oa2, d7c0ob2
  automated match to d7bvta_
  complexed with co2, co3, edo, fgo, gol, na, peg
Domain(s) for 7c0r:
1. Domain d7c0ra1: 7c0r A:1-396 [417693]
  Other proteins in same PDB: d7c0ra2, d7c0rb2
  automated match to d7bvta_
  complexed with cl, co2, edo, fgo, gol
2. Domain d7c0rb1: 7c0r B:1-395 [417695]
  Other proteins in same PDB: d7c0ra2, d7c0rb2
  automated match to d7bvta_
  complexed with cl, co2, edo, fgo, gol
Domain(s) for 7c0s:
1. Domain d7c0sa1: 7c0s A:1-395 [417697]
  Other proteins in same PDB: d7c0sa2, d7c0sb2
  automated match to d7bvta_
  complexed with cl, co2, co3, edo, fgo, pge, pgr
2. Domain d7c0sb1: 7c0s B:1-396 [417699]
  Other proteins in same PDB: d7c0sa2, d7c0sb2
  automated match to d7bvta_
  complexed with cl, co2, co3, edo, fgo, pge, pgr
Domain(s) for 7c0t:
- Domain d7c0tb1: 7c0t B:1-395 [417701]
  Other proteins in same PDB: d7c0tb2
  automated match to d7bvta_
  complexed with cl, co2, edo, fgo, gol, pdo, peg, pge, po4
Domain(s) for 7c0v:
1. Domain d7c0va1: 7c0v A:1-395 [417703]
  Other proteins in same PDB: d7c0va2
  automated match to d7bvta_
  complexed with co2, edo, fgo, gol, pdo
2. Domain d7c0vb_: 7c0v B: [417705]
  Other proteins in same PDB: d7c0va2
  automated match to d7bvta_
  complexed with co2, edo, fgo, gol, pdo
Domain(s) for 7c0w:
1. Domain d7c0wa1: 7c0w A:1-395 [417706]
  Other proteins in same PDB: d7c0wa2, d7c0wb2
  automated match to d7bvta_
  complexed with co2, edo, fgo, gol, na
2. Domain d7c0wb1: 7c0w B:1-394 [417708]
  Other proteins in same PDB: d7c0wa2, d7c0wb2
  automated match to d7bvta_
  complexed with co2, edo, fgo, gol, na
Domain(s) for 7c0x:
1. Domain d7c0xa_: 7c0x A: [417710]
  automated match to d7bvta_
  complexed with act, co2, edo, fgo, gol, peg, po2
2. Domain d7c0xb_: 7c0x B: [417711]
  automated match to d7bvta_
  complexed with act, co2, edo, fgo, gol, peg, po2
Domain(s) for 7c0y:
1. Domain d7c0ya1: 7c0y A:1-394 [417712]
  Other proteins in same PDB: d7c0ya2, d7c0yb2
  automated match to d7bvta_
  complexed with co2, edo, fgo, gol, po3
2. Domain d7c0yb1: 7c0y B:1-396 [417714]
  Other proteins in same PDB: d7c0ya2, d7c0yb2
  automated match to d7bvta_
  complexed with co2, edo, fgo, gol, po3
Domain(s) for 7c0z:
1. Domain d7c0za_: 7c0z A: [417716]
  automated match to d7bvta_
  complexed with edo, fgo
2. Domain d7c0zb_: 7c0z B: [417717]
  automated match to d7bvta_
  complexed with edo, fgo
Domain(s) for 7c14:
1. Domain d7c14a1: 7c14 A:1-395 [417718]
  Other proteins in same PDB: d7c14a2
  automated match to d7bvta_
  complexed with edo, fgo, gol, peg
2. Domain d7c14b_: 7c14 B: [417720]
  Other proteins in same PDB: d7c14a2
  automated match to d7bvta_
  complexed with edo, fgo, gol, peg
Domain(s) for 7c15:
1. Domain d7c15a1: 7c15 A:1-394 [417721]
  Other proteins in same PDB: d7c15a2
  automated match to d7bvta_
  complexed with cl, co2, co3, edo, fgo, gol
2. Domain d7c15b_: 7c15 B: [417723]
  Other proteins in same PDB: d7c15a2
  automated match to d7bvta_
  complexed with cl, co2, co3, edo, fgo, gol
Domain(s) for 7c16:
1. Domain d7c16a1: 7c16 A:1-395 [417724]
  Other proteins in same PDB: d7c16a2
  automated match to d7bvta_
  complexed with cl, co2, co3, edo, fgo, gol, peg
2. Domain d7c16b_: 7c16 B: [417726]
  Other proteins in same PDB: d7c16a2
  automated match to d7bvta_
  complexed with cl, co2, co3, edo, fgo, gol, peg
Domain(s) for 7c19:
1. Domain d7c19a1: 7c19 A:1-394 [417727]
  Other proteins in same PDB: d7c19a2, d7c19b2
  automated match to d7bvta_
  complexed with cl, co2, co3, edo, fgo, gol, peg, po2
2. Domain d7c19b1: 7c19 B:1-395 [417729]
  Other proteins in same PDB: d7c19a2, d7c19b2
  automated match to d7bvta_
  complexed with cl, co2, co3, edo, fgo, gol, peg, po2

More info for Species Thermus thermophilus [TaxId:300852] from c.94.1.0 automated matches

Timeline for Species Thermus thermophilus [TaxId:300852] from c.94.1.0 automated matches:

Species Thermus thermophilus [TaxId:300852] from c.94.1.0 automated matches is new in SCOPe 2.08-stable