Lineage for Species: Norovirus hu/gii-4/kumamoto5/2006/jp [TaxId: 546987]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2822534Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2822535Protein automated matches [190988] (51 species)
    not a true protein
  7. 2822803Species Norovirus hu/gii-4/kumamoto5/2006/jp [TaxId:546987] [419917] (2 PDB entries)

PDB entries in Species: Norovirus hu/gii-4/kumamoto5/2006/jp [TaxId: 546987]:

  1. Domain(s) for 4oox:
  2. Domain(s) for 4opo:
    1. 2822805Domain d4opoa1: 4opo A:225-530 [414091]
      Other proteins in same PDB: d4opoa2, d4opob2
      automated match to d5or7a_
      complexed with act, edo
    2. 2822806Domain d4opob1: 4opo B:225-530 [414093]
      Other proteins in same PDB: d4opoa2, d4opob2
      automated match to d5or7a_
      complexed with act, edo

More info for Species Norovirus hu/gii-4/kumamoto5/2006/jp [TaxId:546987] from b.121.4.0 automated matches

Timeline for Species Norovirus hu/gii-4/kumamoto5/2006/jp [TaxId:546987] from b.121.4.0 automated matches:

  • Species Norovirus hu/gii-4/kumamoto5/2006/jp [TaxId:546987] from b.121.4.0 automated matches is new in SCOPe 2.08-stable