Lineage for Species: Xanthobacter sp., py2 [TaxId: 35809]

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.3: FAD/NAD(P)-binding domain [51904] (1 superfamily)
    core: 3 layers, b/b/a; central parallel beta-sheet of 5 strands, order 32145; top antiparallel beta-sheet of 3 strands, meander
  4. Superfamily c.3.1: FAD/NAD(P)-binding domain [51905] (9 families) (S)
  5. Family c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains [51943] (25 proteins)
    duplication: both domains have similar folds and functions
    most members of the family contain common C-terminal alpha+beta domain
  6. Protein NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase, N- and C-terminal domain [418948] (1 species)
  7. Species Xanthobacter sp., py2 [TaxId:35809] [419404] (5 PDB entries)

PDB entries in Species: Xanthobacter sp., py2 [TaxId: 35809]:

  1. Domain(s) for 1mo9:
    1. Domain d1mo9a1: 1mo9 A:2-192,A:314-383 [79341]
      Other proteins in same PDB: d1mo9a2, d1mo9a3, d1mo9b2, d1mo9b3
      complexed with fad, kpc
      has additional insertions and/or extensions that are not grouped together
    2. Domain d1mo9b1: 1mo9 B:2-192,B:314-383 [79344]
      Other proteins in same PDB: d1mo9a2, d1mo9a3, d1mo9b2, d1mo9b3
      complexed with fad, kpc
      has additional insertions and/or extensions that are not grouped together
  2. Domain(s) for 1mok:
    1. Domain d1moka1: 1mok A:2-192,A:314-383 [79347]
      Other proteins in same PDB: d1moka2, d1moka3, d1mokb2, d1mokb3, d1mokc2, d1mokc3, d1mokd2, d1mokd3
      complexed with fad
      has additional insertions and/or extensions that are not grouped together
    2. Domain d1mokb1: 1mok B:2-192,B:314-383 [79350]
      Other proteins in same PDB: d1moka2, d1moka3, d1mokb2, d1mokb3, d1mokc2, d1mokc3, d1mokd2, d1mokd3
      complexed with fad
      has additional insertions and/or extensions that are not grouped together
    3. Domain d1mokc1: 1mok C:2-192,C:314-383 [79353]
      Other proteins in same PDB: d1moka2, d1moka3, d1mokb2, d1mokb3, d1mokc2, d1mokc3, d1mokd2, d1mokd3
      complexed with fad
      has additional insertions and/or extensions that are not grouped together
    4. Domain d1mokd1: 1mok D:2-192,D:314-383 [79356]
      Other proteins in same PDB: d1moka2, d1moka3, d1mokb2, d1mokb3, d1mokc2, d1mokc3, d1mokd2, d1mokd3
      complexed with fad
      has additional insertions and/or extensions that are not grouped together
  3. Domain(s) for 2c3c:
    1. Domain d2c3ca1: 2c3c A:2-192,A:314-383 [129725]
      Other proteins in same PDB: d2c3ca2, d2c3ca3, d2c3cb2, d2c3cb3
      automated match to d1mo9a1
      complexed with acn, com, fad, nap

      has additional insertions and/or extensions that are not grouped together
    2. Domain d2c3cb1: 2c3c B:2-192,B:314-383 [129728]
      Other proteins in same PDB: d2c3ca2, d2c3ca3, d2c3cb2, d2c3cb3
      automated match to d1mo9a1
      complexed with acn, com, fad, nap

      has additional insertions and/or extensions that are not grouped together
  4. Domain(s) for 2c3d:
    1. Domain d2c3da1: 2c3d A:2-192,A:314-383 [129731]
      Other proteins in same PDB: d2c3da2, d2c3da3, d2c3db2, d2c3db3
      automated match to d1mo9a1
      complexed with com, fad

      has additional insertions and/or extensions that are not grouped together
    2. Domain d2c3db1: 2c3d B:2-192,B:314-383 [129734]
      Other proteins in same PDB: d2c3da2, d2c3da3, d2c3db2, d2c3db3
      automated match to d1mo9a1
      complexed with com, fad

      has additional insertions and/or extensions that are not grouped together
  5. Domain(s) for 3q6j:
    1. Domain d3q6ja1: 3q6j A:2-192,A:314-383 [215082]
      Other proteins in same PDB: d3q6ja2, d3q6ja3, d3q6jb2, d3q6jb3
      automated match to d1mo9a1
      complexed with acn, bct, co2, com, fad, kpc, mg, nap

      has additional insertions and/or extensions that are not grouped together
    2. Domain d3q6jb1: 3q6j B:2-192,B:314-383 [215085]
      Other proteins in same PDB: d3q6ja2, d3q6ja3, d3q6jb2, d3q6jb3
      automated match to d1mo9a1
      complexed with acn, bct, co2, com, fad, kpc, mg, nap

      has additional insertions and/or extensions that are not grouped together

More info for Species Xanthobacter sp., py2 [TaxId:35809] from c.3.1.5 NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase, N- and C-terminal domain

Timeline for Species Xanthobacter sp., py2 [TaxId:35809] from c.3.1.5 NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase, N- and C-terminal domain:

  • Species Xanthobacter sp., py2 [TaxId:35809] from c.3.1.5 NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase, N- and C-terminal domain is new in SCOPe 2.08-stable