Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2787872Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2789270Superfamily b.40.4: Nucleic acid-binding proteins [50249] (18 families) (S)
  5. 2789672Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (36 proteins)
    barrel, closed; n=5, S=8
  6. 2789737Protein Exoribonuclease 2, RNB, C-terminal domain [418922] (1 species)
    RNase II; protein contains 3 S1-like domains in addition to an OB-fold embedded in the catalytic domain
  7. 2789738Species Escherichia coli [TaxId:562] [419350] (3 PDB entries)
    Uniprot P30850

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 2id0:
    1. 2789739Domain d2id0a1: 2id0 A:558-644 [147606]
      Other proteins in same PDB: d2id0a2, d2id0a3, d2id0a4, d2id0b2, d2id0b3, d2id0b4, d2id0c2, d2id0c3, d2id0c4, d2id0d2, d2id0d3, d2id0d4
      complexed with mn
    2. 2789740Domain d2id0b1: 2id0 B:558-644 [147610]
      Other proteins in same PDB: d2id0a2, d2id0a3, d2id0a4, d2id0b2, d2id0b3, d2id0b4, d2id0c2, d2id0c3, d2id0c4, d2id0d2, d2id0d3, d2id0d4
      automated match to d2id0a1
      complexed with mn
    3. 2789741Domain d2id0c1: 2id0 C:558-644 [147614]
      Other proteins in same PDB: d2id0a2, d2id0a3, d2id0a4, d2id0b2, d2id0b3, d2id0b4, d2id0c2, d2id0c3, d2id0c4, d2id0d2, d2id0d3, d2id0d4
      automated match to d2id0a1
      complexed with mn
    4. 2789742Domain d2id0d1: 2id0 D:558-644 [147618]
      Other proteins in same PDB: d2id0a2, d2id0a3, d2id0a4, d2id0b2, d2id0b3, d2id0b4, d2id0c2, d2id0c3, d2id0c4, d2id0d2, d2id0d3, d2id0d4
      automated match to d2id0a1
      complexed with mn
  2. Domain(s) for 2ix0:
  3. Domain(s) for 2ix1:

More info for Species Escherichia coli [TaxId:562] from b.40.4.5 Exoribonuclease 2, RNB, C-terminal domain

Timeline for Species Escherichia coli [TaxId:562] from b.40.4.5 Exoribonuclease 2, RNB, C-terminal domain:

  • Species Escherichia coli [TaxId:562] from b.40.4.5 Exoribonuclease 2, RNB, C-terminal domain is new in SCOPe 2.08-stable