Lineage for Species: Alcaligenes xylosoxidans [TaxId: 85698]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2770398Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 2770399Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. 2771244Family b.6.1.3: Multidomain cupredoxins [49550] (15 proteins)
  6. 2771509Protein Nitrite reductase, NIR, C-terminal domain [418911] (5 species)
  7. 2771665Species Alcaligenes xylosoxidans [TaxId:85698] [419329] (24 PDB entries)
    Uniprot O68601

PDB entries in Species: Alcaligenes xylosoxidans [TaxId: 85698]:

  1. Domain(s) for 1bq5:
    • 2771681Domain d1bq5a2: 1bq5 A:160-340 [23111]
      Other proteins in same PDB: d1bq5a1
      complexed with cu
      has additional insertions and/or extensions that are not grouped together
  2. Domain(s) for 1gs6:
    • 2771698Domain d1gs6x2: 1gs6 X:160-336 [65530]
      Other proteins in same PDB: d1gs6x1
      complexed with cu, mg; mutant
      has additional insertions and/or extensions that are not grouped together
  3. Domain(s) for 1gs7:
    • 2771690Domain d1gs7a2: 1gs7 A:160-336 [65532]
      Other proteins in same PDB: d1gs7a1
      complexed with cu, zn; mutant
      has additional insertions and/or extensions that are not grouped together
  4. Domain(s) for 1gs8:
    • 2771697Domain d1gs8a2: 1gs8 A:160-336 [65534]
      Other proteins in same PDB: d1gs8a1
      complexed with cu, zn; mutant
      has additional insertions and/or extensions that are not grouped together
  5. Domain(s) for 1hau:
    • 2771675Domain d1haua2: 1hau A:160-336 [60880]
      Other proteins in same PDB: d1haua1
      complexed with cu
      has additional insertions and/or extensions that are not grouped together
  6. Domain(s) for 1haw:
    • 2771676Domain d1hawa2: 1haw A:160-336 [60882]
      Other proteins in same PDB: d1hawa1
      complexed with cu1
      has additional insertions and/or extensions that are not grouped together
  7. Domain(s) for 1ndr:
    1. 2771702Domain d1ndra2: 1ndr A:167-340 [23119]
      Other proteins in same PDB: d1ndra1, d1ndrb1, d1ndrc1
      CA-atoms only
      complexed with cu

      has additional insertions and/or extensions that are not grouped together
    2. 2771703Domain d1ndrb2: 1ndr B:167-340 [23121]
      Other proteins in same PDB: d1ndra1, d1ndrb1, d1ndrc1
      CA-atoms only
      complexed with cu

      has additional insertions and/or extensions that are not grouped together
    3. 2771704Domain d1ndrc2: 1ndr C:167-340 [23123]
      Other proteins in same PDB: d1ndra1, d1ndrb1, d1ndrc1
      CA-atoms only
      complexed with cu

      has additional insertions and/or extensions that are not grouped together
  8. Domain(s) for 1nds:
    1. 2771699Domain d1ndsa2: 1nds A:167-340 [23113]
      Other proteins in same PDB: d1ndsa1, d1ndsb1, d1ndsc1
      CA-atoms only
      complexed with cu, no2

      has additional insertions and/or extensions that are not grouped together
    2. 2771700Domain d1ndsb2: 1nds B:167-340 [23115]
      Other proteins in same PDB: d1ndsa1, d1ndsb1, d1ndsc1
      CA-atoms only
      complexed with cu, no2

      has additional insertions and/or extensions that are not grouped together
    3. 2771701Domain d1ndsc2: 1nds C:167-340 [23117]
      Other proteins in same PDB: d1ndsa1, d1ndsb1, d1ndsc1
      CA-atoms only
      complexed with cu, no2

      has additional insertions and/or extensions that are not grouped together
  9. Domain(s) for 1ndt:
    • 2771678Domain d1ndta2: 1ndt A:160-336 [23109]
      Other proteins in same PDB: d1ndta1
      complexed with cl, cu
      has additional insertions and/or extensions that are not grouped together
  10. Domain(s) for 1oe1:
    • 2771666Domain d1oe1a2: 1oe1 A:160-336 [86892]
      Other proteins in same PDB: d1oe1a1
      atomic resolution structure
      complexed with cu, pg4

      has additional insertions and/or extensions that are not grouped together
  11. Domain(s) for 1oe2:
    • 2771667Domain d1oe2a2: 1oe2 A:160-335 [86894]
      Other proteins in same PDB: d1oe2a1
      complexed with cu, pg4; mutant
      has additional insertions and/or extensions that are not grouped together
  12. Domain(s) for 1oe3:
    • 2771668Domain d1oe3a2: 1oe3 A:160-336 [103904]
      Other proteins in same PDB: d1oe3a1
      complexed with cu, pg4
      has additional insertions and/or extensions that are not grouped together
  13. Domain(s) for 1wa0:
    • 2771680Domain d1wa0x2: 1wa0 X:160-336 [114426]
      Other proteins in same PDB: d1wa0x1
      complexed with cu, mes, pg4, so4, zn; mutant
      has additional insertions and/or extensions that are not grouped together
  14. Domain(s) for 1wa1:
    • 2771682Domain d1wa1x2: 1wa1 X:160-336 [114428]
      Other proteins in same PDB: d1wa1x1
      complexed with cu, mes, so4, zn; mutant
      has additional insertions and/or extensions that are not grouped together
  15. Domain(s) for 1wa2:
    • 2771689Domain d1wa2x2: 1wa2 X:160-335 [114430]
      Other proteins in same PDB: d1wa2x1
      complexed with cu, mes, no2, so4, zn; mutant
      has additional insertions and/or extensions that are not grouped together
  16. Domain(s) for 1wae:
    • 2771679Domain d1waea2: 1wae A:160-335 [114435]
      Other proteins in same PDB: d1waea1
      complexed with cu, zn; mutant
      has additional insertions and/or extensions that are not grouped together
  17. Domain(s) for 2jl3:
    1. 2771669Domain d2jl3a2: 2jl3 A:160-335 [304140]
      Other proteins in same PDB: d2jl3a1, d2jl3b1
      automated match to d1gs7a2
      complexed with cu, mes, pg4, zn; mutant

      has additional insertions and/or extensions that are not grouped together
    2. 2771670Domain d2jl3b2: 2jl3 B:160-335 [304142]
      Other proteins in same PDB: d2jl3a1, d2jl3b1
      automated match to d1gs7a2
      complexed with cu, mes, pg4, zn; mutant

      has additional insertions and/or extensions that are not grouped together
  18. Domain(s) for 2vm3:
    • 2771674Domain d2vm3a2: 2vm3 A:160-335 [153313]
      Other proteins in same PDB: d2vm3a1
      automated match to d1haua2
      complexed with cu, pg4, zn

      has additional insertions and/or extensions that are not grouped together
  19. Domain(s) for 2vm4:
    • 2771677Domain d2vm4a2: 2vm4 A:160-335 [153315]
      Other proteins in same PDB: d2vm4a1
      automated match to d1haua2
      complexed with cu, pg4, zn

      has additional insertions and/or extensions that are not grouped together
  20. Domain(s) for 2vw4:
    1. 2771693Domain d2vw4a2: 2vw4 A:160-335 [153659]
      Other proteins in same PDB: d2vw4a1, d2vw4b1
      automated match to d1haua2
      complexed with cu, pg4, zn

      has additional insertions and/or extensions that are not grouped together
    2. 2771694Domain d2vw4b2: 2vw4 B:160-335 [153661]
      Other proteins in same PDB: d2vw4a1, d2vw4b1
      automated match to d1haua2
      complexed with cu, pg4, zn

      has additional insertions and/or extensions that are not grouped together
  21. Domain(s) for 2vw6:
    1. 2771691Domain d2vw6a2: 2vw6 A:160-335 [153667]
      Other proteins in same PDB: d2vw6a1, d2vw6b1
      automated match to d1haua2
      complexed with cu, pg4, zn

      has additional insertions and/or extensions that are not grouped together
    2. 2771692Domain d2vw6b2: 2vw6 B:160-335 [153669]
      Other proteins in same PDB: d2vw6a1, d2vw6b1
      automated match to d1haua2
      complexed with cu, pg4, zn

      has additional insertions and/or extensions that are not grouped together
  22. Domain(s) for 2vw7:
    1. 2771695Domain d2vw7a2: 2vw7 A:160-336 [153671]
      Other proteins in same PDB: d2vw7a1, d2vw7b1
      automated match to d1haua2
      complexed with cu, pg4, zn

      has additional insertions and/or extensions that are not grouped together
    2. 2771696Domain d2vw7b2: 2vw7 B:160-335 [153673]
      Other proteins in same PDB: d2vw7a1, d2vw7b1
      automated match to d1haua2
      complexed with cu, pg4, zn

      has additional insertions and/or extensions that are not grouped together
  23. Domain(s) for 2xwz:
    1. 2771683Domain d2xwza2: 2xwz A:160-336 [207373]
      Other proteins in same PDB: d2xwza1, d2xwzb1, d2xwzc1, d2xwzd1, d2xwze1, d2xwzf1
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4

      has additional insertions and/or extensions that are not grouped together
    2. 2771684Domain d2xwzb2: 2xwz B:160-336 [207375]
      Other proteins in same PDB: d2xwza1, d2xwzb1, d2xwzc1, d2xwzd1, d2xwze1, d2xwzf1
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4

      has additional insertions and/or extensions that are not grouped together
    3. 2771685Domain d2xwzc2: 2xwz C:160-336 [207377]
      Other proteins in same PDB: d2xwza1, d2xwzb1, d2xwzc1, d2xwzd1, d2xwze1, d2xwzf1
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4

      has additional insertions and/or extensions that are not grouped together
    4. 2771686Domain d2xwzd2: 2xwz D:160-336 [207379]
      Other proteins in same PDB: d2xwza1, d2xwzb1, d2xwzc1, d2xwzd1, d2xwze1, d2xwzf1
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4

      has additional insertions and/or extensions that are not grouped together
    5. 2771687Domain d2xwze2: 2xwz E:160-336 [207381]
      Other proteins in same PDB: d2xwza1, d2xwzb1, d2xwzc1, d2xwzd1, d2xwze1, d2xwzf1
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4

      has additional insertions and/or extensions that are not grouped together
    6. 2771688Domain d2xwzf2: 2xwz F:160-335 [207383]
      Other proteins in same PDB: d2xwza1, d2xwzb1, d2xwzc1, d2xwzd1, d2xwze1, d2xwzf1
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4

      has additional insertions and/or extensions that are not grouped together
  24. Domain(s) for 2zon:
    1. 2771671Domain d2zona2: 2zon A:160-335 [227321]
      Other proteins in same PDB: d2zona1, d2zonb1, d2zonc1, d2zong_
      automated match to d2vw6b2
      complexed with cu, hem

      has additional insertions and/or extensions that are not grouped together
    2. 2771672Domain d2zonb2: 2zon B:160-335 [227323]
      Other proteins in same PDB: d2zona1, d2zonb1, d2zonc1, d2zong_
      automated match to d2vw6b2
      complexed with cu, hem

      has additional insertions and/or extensions that are not grouped together
    3. 2771673Domain d2zonc2: 2zon C:160-335 [227325]
      Other proteins in same PDB: d2zona1, d2zonb1, d2zonc1, d2zong_
      automated match to d2vw6b2
      complexed with cu, hem

      has additional insertions and/or extensions that are not grouped together

More info for Species Alcaligenes xylosoxidans [TaxId:85698] from b.6.1.3 Nitrite reductase, NIR, C-terminal domain

Timeline for Species Alcaligenes xylosoxidans [TaxId:85698] from b.6.1.3 Nitrite reductase, NIR, C-terminal domain:

  • Species Alcaligenes xylosoxidans [TaxId:85698] from b.6.1.3 Nitrite reductase, NIR, C-terminal domain is new in SCOPe 2.08-stable