Lineage for Protein: Microvirus capsid proteins, capsid protein F

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2823004Superfamily b.121.5: ssDNA viruses [88645] (4 families) (S)
  5. 2823005Family b.121.5.1: Microviridae-like VP [49612] (2 proteins)
  6. 2823006Protein Microvirus capsid proteins, capsid protein F [418932] (3 species)
    protein includes capsid protein F and spike protein G

Species:

  1. 2823007Bacteriophage alpha3 [TaxId:10849] [419366] (2 PDB entries)
    1. Domain for 1m06:
      • 2823008Domain d1m06f_: 1m06 F: [78326]
        Other proteins in same PDB: d1m06g_
        protein/DNA complex
        has additional subdomain(s) that are not in the common domain
    2. Domain for 1rb8:
      • 2823009Domain d1rb8f_: 1rb8 F: [97279]
        Other proteins in same PDB: d1rb8g_
        protein/DNA complex; complexed with dc
        has additional subdomain(s) that are not in the common domain
  2. 2823010Bacteriophage G4 [TaxId:10843] [419368] (1 PDB entry)
    • Domain for 1gff:
      • 2823011Domain d1gff1_: 1gff 1: [23279]
        Other proteins in same PDB: d1gff2_
        has additional subdomain(s) that are not in the common domain
  3. 2823012Bacteriophage phi-X174 [TaxId:10847] [419370] (4 PDB entries)
    1. Domain for 1al0:
    2. Domain for 1cd3:
    3. Domain for 1kvp:
      • 2823016Domain d1kvpa_: 1kvp A: [23278]
        chimera with a fragment 1-71 of vp1 from spiroplasma virus SPV4
        has additional subdomain(s) that are not in the common domain
    4. Domain for 2bpa:
      • 2823013Domain d2bpa1_: 2bpa 1: [23272]
        Other proteins in same PDB: d2bpa2_
        protein/DNA complex
        has additional subdomain(s) that are not in the common domain

More info for Protein Microvirus capsid proteins, capsid protein F from b.121.5.1: Microviridae-like VP

Timeline for Protein Microvirus capsid proteins, capsid protein F from b.121.5.1: Microviridae-like VP:

  • Protein Microvirus capsid proteins, capsid protein F from b.121.5.1: Microviridae-like VP is new in SCOPe 2.08-stable