Lineage for Protein: Adenovirus hexon, N-terminal domain

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily b.121.2: Group II dsDNA viruses VP [49749] (4 families) (S)
    duplication: consists of two domains of this fold packed together like the nucleoplasmin subunits
    trimeric; in the trimers, the domains are arranged around pseudo six-fold axis
  5. Family b.121.2.2: Adenovirus hexon [49753] (3 proteins)
    each domain is heavily decorated with many insertions
  6. Protein Adenovirus hexon, N-terminal domain [418930] (2 species)

Species:

  1. Human adenovirus type 2 [TaxId:10515] [419362] (1 PDB entry)
    • Domain for 1p2z:
      • Domain d1p2za1: 1p2z A:5-650 [93962]
        Other proteins in same PDB: d1p2za2
        complexed with cit
        has additional subdomain(s) that are not in the common domain
  2. Human adenovirus type 5 [TaxId:28285] [419364] (3 PDB entries)
    1. Domain for 1p30:
    2. Domains for 2bvi:
      1. Domain d2bvif1: 2bvi F:5-636 [129258]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      2. Domain d2bvig1: 2bvi G:5-636 [129260]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      3. Domain d2bvih1: 2bvi H:5-636 [129262]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      4. Domain d2bvii1: 2bvi I:5-636 [129264]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      5. Domain d2bvij1: 2bvi J:5-636 [129266]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      6. Domain d2bvik1: 2bvi K:5-636 [129268]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      7. Domain d2bvil1: 2bvi L:5-636 [129270]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      8. Domain d2bvim1: 2bvi M:5-636 [129272]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      9. Domain d2bvin1: 2bvi N:5-636 [129274]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      10. Domain d2bvio1: 2bvi O:5-636 [129276]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      11. Domain d2bvip1: 2bvi P:5-636 [129278]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
      12. Domain d2bviq1: 2bvi Q:5-636 [129280]
        Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
        has additional subdomain(s) that are not in the common domain
    3. Domain for 3tg7:

More info for Protein Adenovirus hexon, N-terminal domain from b.121.2.2: Adenovirus hexon

Timeline for Protein Adenovirus hexon, N-terminal domain from b.121.2.2: Adenovirus hexon:

  • Protein Adenovirus hexon, N-terminal domain from b.121.2.2: Adenovirus hexon is new in SCOPe 2.08-stable