SCOPe 2.08: Protein: Adenovirus hexon, N-terminal domain

Lineage for Protein: Adenovirus hexon, N-terminal domain

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.2: Group II dsDNA viruses VP [49749] (4 families)

(S)

duplication: consists of two domains of this fold packed together like the nucleoplasmin subunits
trimeric; in the trimers, the domains are arranged around pseudo six-fold axis

Family b.121.2.2: Adenovirus hexon [49753] (3 proteins)
each domain is heavily decorated with many insertions
Protein Adenovirus hexon, N-terminal domain [418930] (2 species)

Species:

Human adenovirus type 2 [TaxId:10515] [419362] (1 PDB entry)
- Domain for 1p2z:
  - Domain d1p2za1: 1p2z A:5-650 [93962]
    Other proteins in same PDB: d1p2za2
    complexed with cit
    has additional subdomain(s) that are not in the common domain

Human adenovirus type 5 [TaxId:28285] [419364] (3 PDB entries)

Domain for 1p30:
- Domain d1p30a1: 1p30 A:5-636 [93964]
  Other proteins in same PDB: d1p30a2
  has additional subdomain(s) that are not in the common domain

Domains for 2bvi:

Domain d2bvif1: 2bvi F:5-636 [129258]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvig1: 2bvi G:5-636 [129260]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvih1: 2bvi H:5-636 [129262]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvii1: 2bvi I:5-636 [129264]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvij1: 2bvi J:5-636 [129266]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvik1: 2bvi K:5-636 [129268]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvil1: 2bvi L:5-636 [129270]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvim1: 2bvi M:5-636 [129272]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvin1: 2bvi N:5-636 [129274]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvio1: 2bvi O:5-636 [129276]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bvip1: 2bvi P:5-636 [129278]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain d2bviq1: 2bvi Q:5-636 [129280]
Other proteins in same PDB: d2bvif2, d2bvig2, d2bvih2, d2bvii2, d2bvij2, d2bvik2, d2bvil2, d2bvim2, d2bvin2, d2bvio2, d2bvip2, d2bviq2
has additional subdomain(s) that are not in the common domain

Domain for 3tg7:
- Domain d3tg7a1: 3tg7 A:7-636 [216809]
  Other proteins in same PDB: d3tg7a2
  automated match to d1p30a1
  has additional subdomain(s) that are not in the common domain

More info for Protein Adenovirus hexon, N-terminal domain from b.121.2.2: Adenovirus hexon

Timeline for Protein Adenovirus hexon, N-terminal domain from b.121.2.2: Adenovirus hexon:

Protein Adenovirus hexon, N-terminal domain from b.121.2.2: Adenovirus hexon is new in SCOPe 2.08-stable