Lineage for d1dgsa3 (1dgs A:1-314)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2585054Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2585823Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families) (S)
    has a circularly permuted topology
  5. 2585839Family d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase [56096] (2 proteins)
    automatically mapped to Pfam PF01653
  6. 2585840Protein Adenylation domain of NAD+-dependent DNA ligase [56097] (4 species)
    contains additional, N-terminal all-alpha subdomain
  7. 2585861Species Thermus filiformis [TaxId:276] [56099] (3 PDB entries)
  8. 2585862Domain d1dgsa3: 1dgs A:1-314 [41581]
    Other proteins in same PDB: d1dgsa1, d1dgsa2, d1dgsb1, d1dgsb2
    protein/DNA complex; complexed with amp, zn

Details for d1dgsa3

PDB Entry: 1dgs (more details), 2.9 Å

PDB Description: crystal structure of nad+-dependent dna ligase from t. filiformis
PDB Compounds: (A:) DNA ligase

SCOPe Domain Sequences for d1dgsa3:

Sequence; same for both SEQRES and ATOM records: (download)

>d1dgsa3 d.142.2.2 (A:1-314) Adenylation domain of NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]}

SCOPe Domain Coordinates for d1dgsa3:

Click to download the PDB-style file with coordinates for d1dgsa3.
(The format of our PDB-style files is described here.)

Timeline for d1dgsa3: