Lineage for d1dika3 (1dik A:2-376)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2541368Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2541369Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2541644Family d.142.1.5: Pyruvate phosphate dikinase, N-terminal domain [56085] (2 protein domains)
    automatically mapped to Pfam PF01326
  6. 2541645Protein Pyruvate phosphate dikinase, N-terminal domain [56086] (3 species)
    the common fold is interrupted by a 4-helical subdomain (residues 112-198)
  7. 2541646Species Clostridium symbiosum [TaxId:1512] [56087] (7 PDB entries)
  8. 2541649Domain d1dika3: 1dik A:2-376 [41572]
    Other proteins in same PDB: d1dika1, d1dika2
    CASP1
    complexed with so4

Details for d1dika3

PDB Entry: 1dik (more details), 2.3 Å

PDB Description: pyruvate phosphate dikinase
PDB Compounds: (A:) pyruvate phosphate dikinase

SCOPe Domain Sequences for d1dika3:

Sequence; same for both SEQRES and ATOM records: (download)

>d1dika3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]}
akwvykfeegnasmrnllggkgcnlaemtilgmpipqgftvtteacteyynsgkqitqei
qdqifeaitwleelngkkfgdtedpllvsvrsaarasmpgmmdtilnlglndvavegfak
ktgnprfaydsyrrfiqmysdvvmevpkshfekiidamkeekgvhfdtdltaddlkelae
kfkavykeamngeefpqepkdqlmgavkavfrswdnpraivyrrmndipgdwgtavnvqt
mvfgnkgetsgtgvaftrnpstgekgiygeylinaqgedvvagvrtpqpitqlendmpdc
ykqfmdlamklekhfrdmqdmeftieegklyflqtrngkrtapaalqiacdlvdegmite
eeavvrieaksldql

SCOPe Domain Coordinates for d1dika3:

Click to download the PDB-style file with coordinates for d1dika3.
(The format of our PDB-style files is described here.)

Timeline for d1dika3: