SCOPe 2.08: Domain d5hzbb_: 5hzb B:

Lineage for d5hzbb_ (5hzb B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.0: automated matches [191569] (1 protein)
   not a true family

6. Protein automated matches [190988] (51 species)
   not a true protein

7. Species Norovirus gii.10 [TaxId:747305] [419941] (9 PDB entries)

8. Domain d5hzbb_: 5hzb B: [414889]
   automated match to d5or7a_
   complexed with edo

Details for d5hzbb_

PDB Entry: 5hzb, 1.55 Å

PDB Description: crystal structure of gii.10 p domain in complex with 2-fucosyllactose (2'fl)

PDB Compounds: (B:) capsid protein

SCOPe Domain Sequences for d5hzbb_:

Sequence, based on SEQRES records:

>d5hzbb_ b.121.4.0 (B:) automated matches {Norovirus gii.10 [TaxId: 747305]}
skpftlpiltlgeltnsrfplpidvlytnpnesaivqcqngrctldgelqgttqllptgi
cafrgkvtqqvqdehrgthwnmtvtnlngtpfdptedvpaplgtpdfsgqiygvisqrnt
ntvpgegnlpanraheaviatyspkftpklgniqfstwetqdvssgqptkftpvglasvd
anshfdqwtlpsysgaltlnmnlapsvapvfpgecllffrsfiplkggygnpaidclmpq
ewvqhlyqesapslsdvalvryvnpetgrtlfeaklhrngfltvarnsagpvvaptngyf
rfdswvnqfytlapm

Sequence, based on observed residues (ATOM records):

>d5hzbb_ b.121.4.0 (B:) automated matches {Norovirus gii.10 [TaxId: 747305]}
skpftlpiltlgeltnsrfplpidvlytnpnesaivqcqngrctldgelqgttqllptgi
cafrgkvtqqvqdehrgthwnmtvtnlngtpfdptedvpaplgtpdfsgqiygvisqrnt
lpanraheaviatyspkftpklgniqfstwetqdvssgqptkftpvglasvdanshfdqw
tlpsysgaltlnmnlapsvapvfpgecllffrsfiplkggygnpaidclmpqewvqhlyq
esapslsdvalvryvnpetgrtlfeaklhrngfltvarnsagpvvaptngyfrfdswvnq
fytlapm

Timeline for d5hzbb_:

• d5hzbb_ is new in SCOPe 2.08-stable