SCOPe 2.08: Domain d1dv1b3: 1dv1 B:115-330

Lineage for d1dv1b3 (1dv1 B:115-330)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.2: BC ATP-binding domain-like [56067] (7 proteins)

6. Protein Biotin carboxylase (BC), domain 2 [56068] (2 species)
   subunit of acetyl-CoA and pyruvate carboxylases

7. Species Escherichia coli [TaxId:562] [56069] (24 PDB entries)

8. Domain d1dv1b3: 1dv1 B:115-330 [41487]
   Other proteins in same PDB: d1dv1a1, d1dv1a2, d1dv1b1, d1dv1b2
   complexed with po4

Details for d1dv1b3

PDB Entry: 1dv1, 1.9 Å

PDB Description: structure of biotin carboxylase (apo)

PDB Compounds: (B:) biotin carboxylase

SCOPe Domain Sequences for d1dv1b3:

Sequence, based on SEQRES records:

>d1dv1b3 d.142.1.2 (B:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]}
dkvsaiaamkkagvpcvpgsdgplgddmdknraiakrigypviikasgggggrgmrvvrg
daelaqsismtraeakaafsndmvymekylenprhveiqvladgqgnaiylaerdcsmqr
rhqkvveeapapgitpelrryigercakacvdigyrgagtfeflfengefyfiemntriq
vehpvtemitgvdlikeqlriaagqplsikqeevhv

Sequence, based on observed residues (ATOM records):

>d1dv1b3 d.142.1.2 (B:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]}
dkvsaiaamkkagvpcvpgsdgplgddmdknraiakrigypviikmrvvrgdaelaqsis
mtraymekylenprhveiqvladgqgnaiylaerdcsmqrrhqkvveeapapgitpelrr
yigercakacvdigyrgagtfeflfengefyfiemntriqvehpvtemitgvdlikeqlr
iaagqplsikqeevhv

Timeline for d1dv1b3:

• d1dv1b3 first appeared (with stable ids) in SCOP 1.55
  
• d1dv1b3 appears in SCOPe 2.07