SCOPe 2.08: Domain d4z4ra_: 4z4r A:

Lineage for d4z4ra_ (4z4r A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.0: automated matches [191569] (1 protein)
   not a true family

6. Protein automated matches [190988] (51 species)
   not a true protein

7. Species Norovirus gii.10 [TaxId:747305] [419941] (9 PDB entries)

8. Domain d4z4ra_: 4z4r A: [414525]
   automated match to d5or7a_
   complexed with edo, ful

Details for d4z4ra_

PDB Entry: 4z4r, 1.8 Å

PDB Description: crystal structure of gii.10 p domain in complex with 300mm fucose

PDB Compounds: (A:) capsid protein

SCOPe Domain Sequences for d4z4ra_:

Sequence; same for both SEQRES and ATOM records:

>d4z4ra_ b.121.4.0 (A:) automated matches {Norovirus gii.10 [TaxId: 747305]}
kpftlpiltlgeltnsrfplpidvlytnpnesaivqcqngrctldgelqgttqllptgic
afrgkvtqqvqdehrgthwnmtvtnlngtpfdptedvpaplgtpdfsgqiygvisqrntn
tvpgegnlpanraheaviatyspkftpklgniqfstwetqdvssgqptkftpvglasvda
nshfdqwtlpsysgaltlnmnlapsvapvfpgecllffrsfiplkggygnpaidclmpqe
wvqhlyqesapslsdvalvryvnpetgrtlfeaklhrngfltvarnsagpvvaptngyfr
fdswvnqfytlapm

Timeline for d4z4ra_:

• d4z4ra_ is new in SCOPe 2.08-stable